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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d051787_P001 Maize mitochondrion 94.46 94.85
Zm00001d017941_P001 Maize plasma membrane 94.46 93.31
Os02t0731900-01 Rice plasma membrane 90.14 87.62
TraesCS6D01G274600.1 Wheat golgi, plasma membrane 86.24 86.78
TraesCS6A01G293700.1 Wheat golgi, plasma membrane 86.24 86.78
TraesCS6B01G324200.1 Wheat plasma membrane 85.83 86.36
HORVU6Hr1G073300.1 Barley golgi, plasma membrane 85.63 86.16
TraesCS1B01G421100.1 Wheat golgi 77.21 81.03
TraesCS1A01G392800.1 Wheat plasma membrane 77.0 80.65
TraesCS1D01G401000.1 Wheat plasma membrane 76.8 80.6
KXG19727 Sorghum mitochondrion, plastid 78.85 77.89
EER89559 Sorghum mitochondrion, plasma membrane 76.18 75.71
HORVU1Hr1G086760.1 Barley cytosol 77.0 74.26
KXG19733 Sorghum endoplasmic reticulum, plasma membrane, vacuole 63.04 63.83
EER92628 Sorghum plasma membrane 63.04 62.15
OQU76197 Sorghum golgi 60.78 61.8
KRG90814 Soybean cytosol, golgi, plasma membrane 62.22 61.09
EER88189 Sorghum endoplasmic reticulum, plasma membrane, vacuole 60.37 61.0
KRH35956 Soybean plasma membrane 62.01 60.89
EES03073 Sorghum endoplasmic reticulum, golgi, plasma membrane 61.19 60.82
VIT_14s0006g02990.t01 Wine grape plasma membrane 60.99 60.37
Solyc02g085870.2.1 Tomato plasma membrane 61.19 60.08
PGSC0003DMT400032993 Potato plasma membrane 60.99 59.88
VIT_01s0011g03490.t01 Wine grape cytosol, golgi, plasma membrane 60.57 59.48
KRH45255 Soybean endoplasmic reticulum, peroxisome, plasma membrane 60.37 59.27
Bra024749.1-P Field mustard plasma membrane 60.37 59.15
CDY42109 Canola plasma membrane 60.37 59.15
PGSC0003DMT400037757 Potato plastid 55.85 59.0
GSMUA_Achr3P07400_001 Banana plasma membrane 47.02 58.87
Bra004034.1-P Field mustard plasma membrane 59.34 58.74
PGSC0003DMT400062136 Potato cytosol, golgi, plasma membrane 59.75 58.67
CDY04232 Canola plasma membrane 59.75 58.55
AT1G25450.1 Thale cress plasma membrane 59.14 58.54
CDY07381 Canola plasma membrane 59.55 58.35
EES00849 Sorghum endoplasmic reticulum, golgi 58.93 58.1
Solyc02g063140.2.1 Tomato golgi 59.14 58.06
AT1G68530.1 Thale cress plasma membrane 59.14 57.95
EER89567 Sorghum endoplasmic reticulum, golgi, plastid 54.21 57.89
PGSC0003DMT400037714 Potato plasma membrane 57.91 57.09
Solyc05g009270.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 57.29 56.48
VIT_19s0093g00440.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 55.65 55.08
GSMUA_Achr5P05870_001 Banana plasma membrane 47.02 54.52
Solyc05g009280.2.1 Tomato golgi, plasma membrane, plastid 57.08 53.56
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 52.16 48.85
EES06493 Sorghum endoplasmic reticulum, peroxisome, plasma membrane, plastid 52.36 48.66
EER88601 Sorghum endoplasmic reticulum, plasma membrane, plastid 50.1 47.29
EES19987 Sorghum cytosol, endoplasmic reticulum, plastid 49.49 46.98
KXG28804 Sorghum plastid 50.1 46.74
EER95458 Sorghum mitochondrion 49.69 45.75
EER91722 Sorghum peroxisome 50.1 45.61
EES08876 Sorghum cytosol, endoplasmic reticulum, plasma membrane 49.49 45.3
EER91618 Sorghum plastid 45.79 42.56
KXG39781 Sorghum peroxisome 47.23 41.89
EER95395 Sorghum cytosol, peroxisome, plasma membrane 44.15 39.59
EES19986 Sorghum cytosol 6.57 14.48
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1UniProt:A0A194YRG0
InterPro:ACP_syn_III_CInterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629
GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039EnsemblPlants:KXG30818
ProteinID:KXG30818ProteinID:KXG30818.1PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF12MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
EnsemblPlantsGene:SORBI_3004G249400SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0007F2D1B6SEG:seg
Description
hypothetical protein
Coordinates
chr4:-:59620416..59622559
Molecular Weight (calculated)
53911.7 Da
IEP (calculated)
8.959
GRAVY (calculated)
0.091
Length
487 amino acids
Sequence
(BLAST)
001: MSTMGSSAQL RRLKPLYQLV VNNILAIVAV PLAASVLLKA ASLGPEEILA RALALRPAHM FLLAFLPAAA TVLYLMLRPR AVYLVDYACF RTNPNCRVPF
101: ATFLEHSRVW PGFDERSVRF MTRLLERSGL GEETCLPYAQ HYIPPSRDLE SSRAEAELVI FSAIDDLLAK TGVSPQDIDI LVVNCSLFAP TPSFTDMIMH
201: RYELRKDVRN VHLSGMGCSA GLISVELARN LLQVAPRGAR ALVVSTETIT PNYYMGRERA MLLPNCLFRM GGAAALLSTS GAGARFRLAR VVRTLRGASD
301: SAYRCVYQEE DDRGNVGINL SKDLMNIAGD ALKANITAMG PLVLPASEQL LFALSFIARK VLNNRIKPYI PDFRTAFEHF CIHAGGRAVI DELQRSLTLS
401: DEQVEASRMT LHRFGNTSSS SLWYELAYIE AKGRMRTGDR VWMIGFGSGF KCNSAAWECI RPAANADGPW ANCIHRYPVH IPDVLKH
Best Arabidopsis Sequence Match ( AT1G25450.1 )
(BLAST)
001: MSDFSSSVKL KYVKLGYQYL INNFLTLLLI PVIATVAIEL LRMGPEEILS VLNSLHFELL HILCSSFLII FVSTVYFMSK PRTVYLVDYS CYKPPVTCRV
101: PFSSFMEHSR LILKDNPKSV EFQMRILERS GLGEETCLPP AIHYIPPTPT MESARNEAQM VIFTAMEDLF KNTGLKPKDI DILIVNCSLF SPTPSLSAMI
201: INKYKLRSNI KSYNLSGMGC SASLISVDVA RDLLQVHPNS NAIIISTEII TPNYYKGNER AMLLPNCLFR MGGAAILLSN RRSDRWRAKY KLCHLVRTHR
301: GADDKSYNCV MEQEDKNGNV GINLSKDLMT IAGEALKANI TTIGPLVLPA SEQLLFLSSL IGRKIFNPKW KPYIPDFKQA FEHFCIHAGG RAVIDELQKN
401: LQLSGEHVEA SRMTLHRFGN TSSSSLWYEL SYIEAQGRMK RNDRVWQIAF GSGFKCNSAV WKCNRTIKTP TDGAWSDCIE RYPVFIPEVV KL
Arabidopsis Description
KCS53-ketoacyl-CoA synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.