CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0574500-01	Rice	nucleus	99.09	99.09
TraesCS1D01G420600.2	Wheat	cytosol	98.19	98.19
TraesCS1B01G443100.1	Wheat	cytosol	98.19	98.19
TraesCS1A01G413000.1	Wheat	golgi	98.19	98.19
EES19964	Sorghum	endoplasmic reticulum, plasma membrane, plastid	18.55	7.88
EER88601	Sorghum	endoplasmic reticulum, plasma membrane, plastid	17.65	7.56
EER92628	Sorghum	plasma membrane	16.74	7.49
EES19987	Sorghum	cytosol, endoplasmic reticulum, plastid	17.19	7.41
KXG28804	Sorghum	plastid	17.19	7.28
EER89559	Sorghum	mitochondrion, plasma membrane	15.84	7.14
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	17.19	7.14
EER91722	Sorghum	peroxisome	17.19	7.1
EES06493	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	16.74	7.06
EER91618	Sorghum	plastid	16.74	7.06
EER95458	Sorghum	mitochondrion	16.74	6.99
EES00849	Sorghum	endoplasmic reticulum, golgi	15.38	6.88
CDY49219	Canola	endoplasmic reticulum, plasma membrane	14.03	6.84
EER95395	Sorghum	cytosol, peroxisome, plasma membrane	16.74	6.81
EES03073	Sorghum	endoplasmic reticulum, golgi, plasma membrane	14.93	6.73
KXG19733	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	14.48	6.65
KXG30818	Sorghum	golgi, mitochondrion	14.48	6.57
KXG39781	Sorghum	peroxisome	16.29	6.56
KXG19727	Sorghum	mitochondrion, plastid	14.03	6.29
EER89567	Sorghum	endoplasmic reticulum, golgi, plastid	12.67	6.14
OQU76197	Sorghum	golgi	13.12	6.05
EER88189	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	12.22	5.6
CDY49218	Canola	plasma membrane	0.0	0.0

Protein Annotations

MapMan:23.5.1.4	Gene3D:3.40.50.300	EntrezGene:8083787	UniProt:C5YW22	EnsemblPlants:EES19986	ProteinID:EES19986
ProteinID:EES19986.1	GO:GO:0000054	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0006913	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0016787	InterPro:IPR002041	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00627	PFscan:PS51418	PANTHER:PTHR24071	PANTHER:PTHR24071:SF8	InterPro:Ran_GTPase
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	EnsemblPlantsGene:SORBI_3009G240900	SUPFAM:SSF52540
unigene:Sbi.601	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00017B7770	RefSeq:XP_002441556.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:57805385..57809048

Molecular Weight (calculated)

25062.0 Da

IEP (calculated)

7.148

GRAVY (calculated)

-0.391

Length

221 amino acids

Sequence
(BLAST)

001: MALPNQGTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFTTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTSRLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDPNLHFV EAVALKPPEV TIDMAMQQQH
201: EAELAAAAAQ PLPDDDDDLI E

Best Arabidopsis Sequence Match ( AT5G55190.1 )
(BLAST)

001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E

Arabidopsis Description

RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.