Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G413000.1 | Wheat | golgi | 100.0 | 100.0 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 100.0 | 100.0 |
| EES19986 | Sorghum | cytosol | 98.19 | 98.19 |
| Os05t0574500-01 | Rice | nucleus | 98.19 | 98.19 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 19.46 | 8.19 |
| TraesCS1B01G387800.2 | Wheat | plasma membrane | 17.65 | 7.78 |
| TraesCS6B01G473900.1 | Wheat | mitochondrion | 17.65 | 7.74 |
| TraesCS6B01G207000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 18.1 | 7.63 |
| TraesCS6B01G098300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 17.65 | 7.6 |
| TraesCS1B01G421100.1 | Wheat | golgi | 15.84 | 7.54 |
| TraesCS7B01G254900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 17.65 | 7.49 |
| TraesCS4B01G278800.1 | Wheat | golgi | 16.74 | 7.25 |
| CDY49219 | Canola | endoplasmic reticulum, plasma membrane | 14.48 | 7.06 |
| TraesCS6B01G324200.1 | Wheat | plasma membrane | 15.38 | 7.02 |
| TraesCS7B01G113100.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 14.03 | 6.89 |
| TraesCS1B01G048000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 14.93 | 6.76 |
| TraesCS4B01G274700.1 | Wheat | plastid | 14.48 | 6.68 |
| TraesCS3B01G488500.1 | Wheat | plasma membrane | 14.48 | 6.53 |
| TraesCS7B01G113000.1 | Wheat | golgi | 14.48 | 6.52 |
| TraesCS7B01G449300.1 | Wheat | plasma membrane | 14.03 | 6.49 |
| TraesCS4B01G297500.1 | Wheat | golgi | 15.84 | 6.48 |
| TraesCS4B01G225500.1 | Wheat | peroxisome | 15.84 | 6.41 |
| TraesCS6B01G036000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 14.03 | 6.35 |
| TraesCS2B01G535700.1 | Wheat | endoplasmic reticulum, plasma membrane | 13.12 | 6.33 |
| TraesCS3B01G313800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 14.48 | 6.32 |
| TraesCS7B01G113200.1 | Wheat | golgi | 14.03 | 6.24 |
| TraesCS6B01G372900.1 | Wheat | golgi | 14.03 | 6.16 |
| TraesCS7B01G006300.1 | Wheat | golgi | 13.57 | 6.16 |
| TraesCS7B01G449000.1 | Wheat | golgi | 13.57 | 6.16 |
| TraesCS6B01G373000.1 | Wheat | endoplasmic reticulum, golgi | 11.31 | 6.0 |
| TraesCS7B01G006100.1 | Wheat | mitochondrion | 12.67 | 5.75 |
| TraesCS1B01G053700.1 | Wheat | endoplasmic reticulum | 12.67 | 5.63 |
| TraesCS2B01G535600.1 | Wheat | golgi, mitochondrion | 11.31 | 5.15 |
| CDY49218 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| MapMan:23.5.1.4 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0016787 |
| InterPro:IPR002041 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00627 | PFscan:PS51418 | PANTHER:PTHR24071 |
| PANTHER:PTHR24071:SF8 | InterPro:Ran_GTPase | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS1B01G443100 | EnsemblPlants:TraesCS1B01G443100.1 |
| TIGR:cd00877 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:664285427..664287580
Molecular Weight (calculated)
25135.0 Da
IEP (calculated)
7.148
GRAVY (calculated)
-0.401
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPNQNTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFTTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTSRLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDPNIHFV EAVALKPPEV TFDLAMQQQH
201: EAELAAAAAQ PLPDDDDDLI E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDPNIHFV EAVALKPPEV TFDLAMQQQH
201: EAELAAAAAQ PLPDDDDDLI E
001: MALPNQQTVD YPSFKLVIVG DGGTGKTTFV KRHLTGEFEK KYEPTIGVEV HPLDFFTNCG KIRFYCWDTA GQEKFGGLRD GYYIHGQCAI IMFDVTARLT
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
101: YKNVPTWHRD LCRVCENIPI VLCGNKVDVK NRQVKAKQVT FHRKKNLQYY EISAKSNYNF EKPFLYLARK LAGDANLHFV ESPALAPPEV QIDLAAQQQH
201: EAELAAAASQ PLPDDDDDTF E
Arabidopsis Description
RAN3GTP-binding nuclear protein [Source:UniProtKB/TrEMBL;Acc:A0A178UD71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.