Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G025200.1 | Wheat | plasma membrane | 90.78 | 90.97 |
| HORVU6Hr1G004830.1 | Barley | golgi | 88.93 | 87.5 |
| TraesCS1B01G048000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 77.66 | 77.66 |
| TraesCS7B01G113200.1 | Wheat | golgi | 77.25 | 75.86 |
| TraesCS1B01G053700.1 | Wheat | endoplasmic reticulum | 73.57 | 72.23 |
| OQU76197 | Sorghum | golgi | 62.3 | 63.47 |
| TraesCS7B01G113000.1 | Wheat | golgi | 61.07 | 60.69 |
| TraesCS1B01G421100.1 | Wheat | golgi | 57.58 | 60.56 |
| TraesCS6B01G324200.1 | Wheat | plasma membrane | 59.22 | 59.71 |
| TraesCS4B01G274700.1 | Wheat | plastid | 57.17 | 58.25 |
| TraesCS7B01G449300.1 | Wheat | plasma membrane | 53.69 | 54.81 |
| TraesCS3B01G488500.1 | Wheat | plasma membrane | 54.92 | 54.69 |
| TraesCS7B01G449000.1 | Wheat | golgi | 54.51 | 54.62 |
| TraesCS7B01G113100.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 50.2 | 54.44 |
| TraesCS6B01G372900.1 | Wheat | golgi | 55.53 | 53.88 |
| TraesCS6B01G373000.1 | Wheat | endoplasmic reticulum, golgi | 44.26 | 51.8 |
| TraesCS7B01G006100.1 | Wheat | mitochondrion | 51.23 | 51.33 |
| TraesCS2B01G535700.1 | Wheat | endoplasmic reticulum, plasma membrane | 47.75 | 50.87 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 40.37 | 50.64 |
| PGSC0003DMT400037757 | Potato | plastid | 47.75 | 50.54 |
| TraesCS2B01G535600.1 | Wheat | golgi, mitochondrion | 50.2 | 50.52 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 50.61 | 50.2 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 43.03 | 50.0 |
| KRH35956 | Soybean | plasma membrane | 50.82 | 50.0 |
| TraesCS7B01G006300.1 | Wheat | golgi | 49.8 | 49.9 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 50.61 | 49.8 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 50.41 | 49.6 |
| TraesCS3B01G313800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 51.23 | 49.41 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 50.2 | 49.4 |
| Bra004034.1-P | Field mustard | plasma membrane | 49.8 | 49.39 |
| CDY04232 | Canola | plasma membrane | 50.0 | 49.09 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 49.8 | 48.99 |
| CDY07381 | Canola | plasma membrane | 49.8 | 48.89 |
| Bra024749.1-P | Field mustard | plasma membrane | 49.8 | 48.89 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 49.39 | 48.79 |
| CDY42109 | Canola | plasma membrane | 49.59 | 48.69 |
| Solyc02g063140.2.1 | Tomato | golgi | 49.39 | 48.59 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 49.39 | 48.59 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 49.18 | 48.58 |
| AT1G25450.1 | Thale cress | plasma membrane | 48.57 | 48.17 |
| AT1G68530.1 | Thale cress | plasma membrane | 48.98 | 48.09 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 48.57 | 47.78 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 47.75 | 47.36 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 48.77 | 45.86 |
| TraesCS6B01G098300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 45.29 | 43.08 |
| TraesCS6B01G207000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 45.7 | 42.56 |
| TraesCS4B01G278800.1 | Wheat | golgi | 44.26 | 42.35 |
| TraesCS7B01G254900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 44.67 | 41.84 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 44.47 | 41.33 |
| TraesCS6B01G473900.1 | Wheat | mitochondrion | 42.01 | 40.67 |
| TraesCS1B01G387800.2 | Wheat | plasma membrane | 40.57 | 39.52 |
| TraesCS4B01G297500.1 | Wheat | golgi | 42.62 | 38.52 |
| TraesCS4B01G225500.1 | Wheat | peroxisome | 41.6 | 37.18 |
| TraesCS1B01G443100.1 | Wheat | cytosol | 6.35 | 14.03 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF64 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS6B01G036000 | EnsemblPlants:TraesCS6B01G036000.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:21091674..21093140
Molecular Weight (calculated)
53771.7 Da
IEP (calculated)
8.905
GRAVY (calculated)
0.153
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVRLSDMVI SPSHLKHLFE IMVNNFLLLV ATPAMVLVLL RKAAQLGPDE ILSCLHGLRQ VHVLLAVFLP FALATLYLMS RPRSVYLVDY SCCRPNSNCR
101: VSIGSATENA RFSLDDGGYR FMARMLKRSG LGDQTYVHPS LHYIPPGCTL SEGRDEAEQV IFAAVDDLLA KTGICPEAID ILVTNCTAFN PTPSLADIVV
201: NRYKLRADIR SMHISGMGCS AGVISLEVAR NLLQAAPRGA HALMVSTEST LLINYTGKNR AMLLPAALFR MGAAAVLLST STSKSRFRLR HIVRTITAAQ
301: DRAYRCAYQE EDDVGEMGIN LSKELVAVAG DALQANIVAI GSLVLPPSEK LLFALSFVAR KVFNKKIKLY VPDFRRAFQH FCIHCGGRAV IDAVQTSLRL
401: SDENIEPSRM TLHRFGNTSS SSLWYELAYI EAKRRMRKGD RVWMVGFGSG FKCNSAVWQC ITSASNTDIG TPWADSIHMY PLNISEVS
101: VSIGSATENA RFSLDDGGYR FMARMLKRSG LGDQTYVHPS LHYIPPGCTL SEGRDEAEQV IFAAVDDLLA KTGICPEAID ILVTNCTAFN PTPSLADIVV
201: NRYKLRADIR SMHISGMGCS AGVISLEVAR NLLQAAPRGA HALMVSTEST LLINYTGKNR AMLLPAALFR MGAAAVLLST STSKSRFRLR HIVRTITAAQ
301: DRAYRCAYQE EDDVGEMGIN LSKELVAVAG DALQANIVAI GSLVLPPSEK LLFALSFVAR KVFNKKIKLY VPDFRRAFQH FCIHCGGRAV IDAVQTSLRL
401: SDENIEPSRM TLHRFGNTSS SSLWYELAYI EAKRRMRKGD RVWMVGFGSG FKCNSAVWQC ITSASNTDIG TPWADSIHMY PLNISEVS
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.