Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 2
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400037757 Potato plastid 85.36 96.1
Solyc02g085870.2.1 Tomato plasma membrane 71.68 75.0
Solyc02g063140.2.1 Tomato golgi 70.33 73.59
GSMUA_Achr2P21590_001 Banana golgi, peroxisome, plastid 52.41 70.47
EER92628 Sorghum plasma membrane 66.67 70.04
Os03t0220100-01 Rice golgi, mitochondrion 66.67 70.04
Solyc05g009270.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 66.67 70.04
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 66.67 70.04
GSMUA_Achr3P02180_001 Banana plasma membrane 47.4 69.69
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi, plasma membrane 59.34 69.53
TraesCS4D01G242200.1 Wheat mitochondrion, plasma membrane 66.28 69.35
HORVU4Hr1G067340.2 Barley golgi 66.47 68.86
TraesCS4A01G065300.1 Wheat mitochondrion, plasma membrane 65.7 68.75
GSMUA_Achr8P30930_001 Banana endoplasmic reticulum, extracellular 50.48 67.88
Zm00001d048061_P001 Maize golgi 64.55 67.81
GSMUA_Achr3P07400_001 Banana plasma membrane 49.9 66.58
Zm00001d045660_P001 Maize mitochondrion 37.19 66.32
Zm00001d037328_P001 Maize cytosol 44.7 63.22
GSMUA_Achr5P05870_001 Banana plasma membrane 48.75 60.24
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 58.19 58.41
TraesCS7A01G032900.1 Wheat cytosol 38.92 58.38
TraesCS1B01G421100.1 Wheat golgi 51.64 57.76
Zm00001d051787_P001 Maize mitochondrion 53.76 57.53
Solyc08g067410.1.1 Tomato plasma membrane 55.68 57.23
TraesCS1A01G392800.1 Wheat plasma membrane 51.25 57.2
KXG30818 Sorghum golgi, mitochondrion 53.56 57.08
Solyc06g065560.1.1 Tomato nucleus 56.26 56.92
TraesCS1D01G401000.1 Wheat plasma membrane 50.87 56.9
TraesCS7B01G113000.1 Wheat golgi 53.76 56.82
TraesCS7D01G208500.1 Wheat golgi 53.76 56.48
TraesCS7A01G205700.1 Wheat golgi 53.37 56.42
Solyc12g006820.1.1 Tomato plasma membrane 54.34 56.4
Solyc09g083050.2.1 Tomato plasma membrane 55.68 56.34
HORVU6Hr1G073300.1 Barley golgi, plasma membrane 52.41 56.2
TraesCS6D01G274600.1 Wheat golgi, plasma membrane 52.41 56.2
Zm00001d017941_P001 Maize plasma membrane 53.37 56.19
TraesCS7D01G208600.1 Wheat cytosol 41.23 56.02
TraesCS4D01G008100.1 Wheat plasma membrane 46.05 55.84
TraesCS6B01G324200.1 Wheat plasma membrane 52.02 55.79
Os02t0731900-01 Rice plasma membrane 53.76 55.69
Solyc03g005320.2.1 Tomato plasma membrane 55.68 55.68
TraesCS6A01G293700.1 Wheat golgi, plasma membrane 51.83 55.58
HORVU0Hr1G038430.1 Barley endoplasmic reticulum, plasma membrane 48.75 55.0
EER89559 Sorghum mitochondrion, plasma membrane 51.45 54.49
TraesCS4A01G303900.1 Wheat plasma membrane 51.45 54.27
KXG19727 Sorghum mitochondrion, plastid 51.45 54.16
TraesCS4B01G274700.1 Wheat plastid 49.71 53.86
TraesCS4A01G031500.1 Wheat plasma membrane 49.9 53.62
TraesCS4D01G273400.1 Wheat endoplasmic reticulum 49.9 53.62
TraesCS7D01G209400.1 Wheat cytosol 38.54 53.48
TraesCSU01G166100.1 Wheat plasma membrane 50.67 53.46
Solyc06g053870.2.1 Tomato mitochondrion 49.9 53.29
TraesCS7D01G519300.1 Wheat golgi, plasma membrane 48.55 52.72
Os06t0262800-01 Rice plasma membrane 50.1 52.63
TraesCS7D01G519400.1 Wheat plasma membrane 48.55 52.61
TraesCS7D01G035700.1 Wheat plasma membrane 48.75 52.16
HORVU1Hr1G086760.1 Barley cytosol 50.67 52.08
TraesCS7A01G532300.1 Wheat golgi 47.98 51.98
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 49.33 51.93
HORVU7Hr1G006910.1 Barley plasma membrane 48.55 51.75
TraesCS7D01G102300.1 Wheat mitochondrion 28.71 51.38
KXG19733 Sorghum endoplasmic reticulum, plasma membrane, vacuole 47.59 51.35
TraesCS2D01G508000.1 Wheat mitochondrion 31.41 51.26
Solyc10g009240.2.1 Tomato peroxisome 52.22 51.23
HORVU7Hr1G023540.1 Barley mitochondrion 28.13 51.23
TraesCS7B01G449300.1 Wheat plasma membrane 47.01 51.05
HORVU3Hr1G097570.1 Barley golgi 47.98 50.92
TraesCS1A01G040900.1 Wheat golgi 46.82 50.84
TraesCS3B01G488500.1 Wheat plasma membrane 47.98 50.82
TraesCS7B01G449000.1 Wheat golgi 47.59 50.72
TraesCS1D01G042300.1 Wheat golgi 46.63 50.63
TraesCS7D01G029500.1 Wheat plasma membrane 44.51 50.55
TraesCS1A01G037600.1 Wheat endoplasmic reticulum, golgi, plasma membrane 47.4 50.41
TraesCS4A01G456600.1 Wheat plasma membrane 43.93 50.33
TraesCS3D01G444000.1 Wheat golgi 47.4 50.31
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 47.98 50.3
TraesCS1D01G039200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 47.01 50.21
EES03073 Sorghum endoplasmic reticulum, golgi, plasma membrane 47.4 50.2
TraesCS7D01G089200.1 Wheat endoplasmic reticulum, plasma membrane 45.66 50.11
TraesCS3A01G451100.1 Wheat plasma membrane 47.21 50.1
EER89567 Sorghum endoplasmic reticulum, golgi, plastid 43.93 50.0
EES00849 Sorghum endoplasmic reticulum, golgi 47.59 50.0
Zm00001d009354_P001 Maize endoplasmic reticulum 46.82 50.0
HORVU6Hr1G094160.2 Barley endoplasmic reticulum, golgi, plasma membrane 47.01 49.8
Os01t0529800-01 Rice plasma membrane 45.86 49.79
TraesCS7A01G108300.1 Wheat plasma membrane 42.97 49.78
TraesCS1B01G053700.1 Wheat endoplasmic reticulum 47.59 49.7
TraesCS7B01G113200.1 Wheat golgi 47.59 49.7
TraesCS7A01G206000.1 Wheat golgi 47.21 49.7
TraesCS7D01G208800.1 Wheat endoplasmic reticulum 46.44 49.69
HORVU7Hr1G042040.1 Barley golgi 47.4 49.6
TraesCS1B01G048000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 46.63 49.59
TraesCS6B01G373000.1 Wheat endoplasmic reticulum, golgi 39.5 49.16
HORVU7Hr1G042050.1 Barley golgi 46.05 49.08
TraesCS7B01G113100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 42.39 48.89
OQU76197 Sorghum golgi 45.09 48.85
HORVU6Hr1G004830.1 Barley golgi 46.63 48.79
TraesCS6B01G036000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.86 48.77
EER88189 Sorghum endoplasmic reticulum, plasma membrane, vacuole 45.28 48.76
TraesCS3A01G279400.1 Wheat plasma membrane 45.86 48.67
TraesCS3D01G279300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.66 48.67
TraesCS6A01G341400.1 Wheat golgi 47.01 48.51
TraesCS7D01G208700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 43.16 48.48
Zm00001d044580_P001 Maize mitochondrion 45.47 48.46
TraesCS7A01G205800.1 Wheat endoplasmic reticulum, golgi, vacuole 42.0 48.44
TraesCS6B01G372900.1 Wheat golgi 46.82 48.31
TraesCS6D01G321600.1 Wheat golgi 46.82 48.31
TraesCS6A01G025200.1 Wheat plasma membrane 45.28 48.25
HORVU7Hr1G023280.1 Barley plasma membrane 42.0 48.23
Zm00001d044579_P001 Maize golgi 45.09 47.37
TraesCS5D01G089800.1 Wheat golgi 44.51 47.24
HORVU6Hr1G082270.1 Barley golgi 46.44 47.07
TraesCS5A01G076500.1 Wheat golgi 44.32 46.84
TraesCS2D01G508200.1 Wheat plasma membrane, plastid 41.23 46.72
TraesCS3B01G313800.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.47 46.64
Os06t0260500-00 Rice mitochondrion 47.01 46.3
TraesCS7D01G102900.1 Wheat golgi, plasma membrane, plastid 42.77 46.25
TraesCS7B01G006100.1 Wheat mitochondrion 43.16 46.0
HORVU5Hr1G122360.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.74 45.95
HORVU5Hr1G087530.1 Barley plasma membrane 42.97 45.88
TraesCS6A01G024400.1 Wheat plasma membrane 43.16 45.81
TraesCS1A01G439000.1 Wheat plasma membrane 44.12 45.8
TraesCS2A01G507700.1 Wheat golgi, plasma membrane 40.27 45.63
TraesCS2A01G014600.1 Wheat plasma membrane 43.55 45.56
HORVU7Hr1G022720.1 Barley plasma membrane 31.41 45.4
TraesCS7B01G006300.1 Wheat golgi 42.58 45.38
TraesCS7A01G108000.1 Wheat golgi, plasma membrane, plastid 41.81 45.21
TraesCS7D01G102400.1 Wheat endoplasmic reticulum, plastid, vacuole 41.81 45.21
TraesCS7A01G532200.1 Wheat cytosol 9.06 45.19
HORVU2Hr1G112840.1 Barley endoplasmic reticulum, golgi 40.46 44.87
TraesCS7A01G107700.1 Wheat mitochondrion, plastid 42.97 44.87
TraesCS7D01G102000.1 Wheat mitochondrion, plastid 42.97 44.87
TraesCS7D01G102800.1 Wheat endoplasmic reticulum, plasma membrane, plastid 38.73 44.77
Solyc08g067260.2.1 Tomato cytosol, peroxisome, plasma membrane 43.55 44.66
TraesCS2B01G535700.1 Wheat endoplasmic reticulum, plasma membrane 39.31 44.54
TraesCS2B01G535600.1 Wheat golgi, mitochondrion 41.43 44.33
Solyc09g065800.2.1 Tomato endoplasmic reticulum, plasma membrane 38.34 44.12
TraesCS2D01G508300.1 Wheat endoplasmic reticulum, plasma membrane 39.11 44.03
TraesCS4D01G008200.1 Wheat plasma membrane 41.62 43.9
Solyc09g065780.2.1 Tomato endoplasmic reticulum, golgi 36.99 43.44
HORVU7Hr1G030880.1 Barley plasma membrane 41.62 43.29
HORVU3Hr1G069880.2 Barley mitochondrion, plastid 44.7 43.28
HORVU7Hr1G022780.1 Barley golgi, mitochondrion 39.11 42.83
TraesCS5D01G017000.1 Wheat endoplasmic reticulum, golgi, plastid 38.92 42.8
TraesCS7A01G107900.1 Wheat golgi, mitochondrion 39.11 42.56
HORVU7Hr1G022580.1 Barley golgi, mitochondrion 29.29 41.64
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039UniProt:K4BXA2PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF5SUPFAM:SSF53901EnsemblPlantsGene:Solyc05g009280.2
EnsemblPlants:Solyc05g009280.2.1TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0002766A5CSEG:seg:
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4BXA2]
Coordinates
chr5:+:3426725..3428812
Molecular Weight (calculated)
58575.8 Da
IEP (calculated)
9.388
GRAVY (calculated)
-0.005
Length
519 amino acids
Sequence
(BLAST)
001: MKNEKGGSHI TYFVLHRSLH VTHIQMSQAQ TSVKLKCAKL GYQYVVNHFL TCLLLPIMAM VFVQAIQLSP EKISNLWNNS IQFDFTKTVC SSVVVILVSI
101: LYFMSRPRGV YLVDYACYKP PLSLRVSFSI FMEHSRIILS SEPKSVEFQL KILERSCLGE DTCLPPAIHY IPPAPSLDTA REEAQMVIFS VMDSLFKKTE
201: LKPKDIDILI VNCSLFSPTP SLSAMVVNKY KMRDNVKSYN LSGMGCSAGL ISIDLARDLL RVHPKSIAVV VSTEIITPNY YRGKDRSMLL PNCLFRMGGA
301: AILLSNKWWI DLRRAKYKLL HTVRTHKGSN DKSYNCVYET EDSEGKTGIS LSKDLMAIAG EALKSNITSL GPLVLPPSEQ LLFLLSLIGR KVFNTKLKPY
401: IPDFKQAFEH FCIHAGGRAV IDELQKNLQL SAEHVEASRM TLHRFGNTSS SSLWYELSYI EAKGRMKKGD RIWQIAFGSG FKCNSAVWKC NKTIETPTDG
501: PWSDCIHKYP VYIPEIVKL
Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.