Factsheet for Solyc10g009240.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028047	Potato	plasma membrane	95.84	94.77
VIT_15s0048g02720.t01	Wine grape	cytosol, peroxisome, plasma membrane	78.83	78.68
Bra032621.1-P	Field mustard	plasma membrane	66.92	72.1
KRH68953	Soybean	cytosol, golgi, nucleus	70.51	70.38
Solyc08g067410.1.1	Tomato	plasma membrane	62.95	65.94
GSMUA_Achr1P02540_001	Banana	cytosol	51.98	64.86
Os03t0245700-02	Rice	cytosol, peroxisome, plastid	62.95	62.59
Solyc06g065560.1.1	Tomato	nucleus	60.11	61.99
Solyc09g083050.2.1	Tomato	plasma membrane	59.74	61.6
TraesCS4D01G226100.1	Wheat	peroxisome	62.38	61.22
Zm00001d030343_P001	Maize	cytosol, peroxisome, plasma membrane	61.63	60.93
HORVU4Hr1G063420.1	Barley	peroxisome	62.76	60.92
TraesCS4A01G068400.1	Wheat	peroxisome	62.0	60.63
Solyc03g005320.2.1	Tomato	plasma membrane	59.36	60.5
EER91722	Sorghum	peroxisome	61.06	60.37
Solyc12g006820.1.1	Tomato	plasma membrane	56.9	60.2
TraesCS4B01G225500.1	Wheat	peroxisome	62.0	60.07
Zm00001d028406_P001	Maize	peroxisome	61.81	59.78
KXG39781	Sorghum	peroxisome	61.81	59.56
Zm00001d047931_P001	Maize	peroxisome	60.68	58.79
AT3G10280.1	Thale cress	endoplasmic reticulum, plasma membrane	50.85	58.61
AT2G46720.1	Thale cress	endoplasmic reticulum, plasma membrane	51.61	58.58
Solyc04g080450.1.1	Tomato	golgi, peroxisome, plasma membrane	54.44	55.71
Solyc02g085870.2.1	Tomato	plasma membrane	51.42	54.84
Solyc06g053870.2.1	Tomato	mitochondrion	50.28	54.73
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	50.47	54.05
Solyc02g063140.2.1	Tomato	golgi	50.66	54.03
Solyc05g013220.2.1	Tomato	endoplasmic reticulum, golgi, plastid	49.72	53.35
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	51.23	52.22
Solyc06g053900.2.1	Tomato	cytosol, plasma membrane, plastid	47.64	50.91
Solyc08g067260.2.1	Tomato	cytosol, peroxisome, plasma membrane	47.26	49.41
Solyc09g065800.2.1	Tomato	endoplasmic reticulum, plasma membrane	37.81	44.35
CDY41551	Canola	golgi	52.36	44.04
Solyc09g065780.2.1	Tomato	endoplasmic reticulum, golgi	36.67	43.89
CDX80041	Canola	endoplasmic reticulum, golgi, plasma membrane	52.74	43.8

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:K4CYA0	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF65	SUPFAM:SSF53901	EnsemblPlantsGene:Solyc10g009240.2
EnsemblPlants:Solyc10g009240.2.1	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000276BD9C	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4CYA0]

Coordinates

chr10:-:3233896..3236001

Molecular Weight (calculated)

59462.2 Da

IEP (calculated)

8.990

GRAVY (calculated)

-0.125

Length

529 amino acids

Sequence
(BLAST)

001: MANESIDMEK ERLTAEMNFK DSSSVVIKIR QKLPDFLQSV KLKYVKLGYG YSCNPLTLVL VATIFSILTL TGLKLDRFYD TWRNEPTLLL IETSTGLTGL
101: IVLFLLLGVY YVKKPRPVFL VDFACYKPED ERKISVDSFL NMTETNGAFE EETIVFQKKI SHRSGLGDET YLPRGITSVP PNLNMKEARA EAEAVMFGAL
201: DSLFSKTQIK PEEIGILIVN CSLFNPTPSL SSMIVNHYKL KTDTKSYNLG GMGCSAGLIS IDLAKQLLKA NPNSYAVVVS MENITLNWYF GNDRSMLLCN
301: CIFRMGGAAM LLSNKSKDRT RSKYELVHTV RTHKGADDNS YNCVYQREDD KGVVGVSLAR ELMAVAGDAL KTNITTLGPS VLPLTEQFRF FMTLVKRKLL
401: KAKVKPYIPD FKLAFEHFCI HAGGRAVLDE IQNNLSLSDW HMEPSRMTLH RFGNTSSSSL WYELAYTESK GRVKKGDRVW QIAFGSGFKC NSAVWKSLRV
501: IDCDEVNANG NPWADCIQRY PVKVALAKQ

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.