Factsheet for Solyc09g083050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
cytosol 1
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015633	Potato	plasma membrane	99.03	97.5
Solyc03g005320.2.1	Tomato	plasma membrane	87.72	86.71
KRH34362	Soybean	plasma membrane	85.19	84.53
KRG92437	Soybean	plasma membrane	84.99	84.33
VIT_05s0020g04540.t01	Wine grape	plasma membrane	85.38	84.07
KRH69063	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	83.63	82.34
KRH31633	Soybean	endoplasmic reticulum, nucleus, plastid	81.68	81.04
Solyc06g065560.1.1	Tomato	nucleus	76.02	76.02
Solyc08g067410.1.1	Tomato	plasma membrane	74.27	75.45
Os11t0591200-01	Rice	mitochondrion	62.38	74.07
Solyc12g006820.1.1	Tomato	plasma membrane	71.54	73.4
TraesCS6A01G073300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	67.06	67.72
GSMUA_Achr3P15310_001	Banana	cytosol, nucleus, plastid	64.13	67.42
Solyc05g013220.2.1	Tomato	endoplasmic reticulum, golgi, plastid	64.72	67.34
Zm00001d048953_P001	Maize	mitochondrion, plastid	67.25	67.25
TraesCS4D01G148300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	67.06	67.19
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	67.06	67.06
TraesCS4A01G164400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	65.89	66.02
KXG28804	Sorghum	plastid	67.06	65.9
Solyc06g053870.2.1	Tomato	mitochondrion	61.6	65.02
Solyc04g080450.1.1	Tomato	golgi, peroxisome, plasma membrane	64.91	64.41
TraesCS6D01G071600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	67.06	63.12
Solyc02g085870.2.1	Tomato	plasma membrane	59.84	61.9
Solyc02g063140.2.1	Tomato	golgi	59.06	61.09
Solyc06g053900.2.1	Tomato	cytosol, plasma membrane, plastid	58.67	60.81
Solyc10g009240.2.1	Tomato	peroxisome	61.6	59.74
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	61.4	59.21
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	55.56	57.69
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	56.34	55.68
Solyc08g067260.2.1	Tomato	cytosol, peroxisome, plasma membrane	51.85	52.57
Solyc09g065800.2.1	Tomato	endoplasmic reticulum, plasma membrane	42.69	48.56
Solyc09g065780.2.1	Tomato	endoplasmic reticulum, golgi	40.35	46.83

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:K4CVT1	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF25	SUPFAM:SSF53901	EnsemblPlantsGene:Solyc09g083050.2
EnsemblPlants:Solyc09g083050.2.1	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000276C52D	:	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4CVT1]

Coordinates

chr9:-:68718974..68721625

Molecular Weight (calculated)

58033.4 Da

IEP (calculated)

9.105

GRAVY (calculated)

0.005

Length

513 amino acids

Sequence
(BLAST)

001: MGDESTRRVS IEANSNKLPN FLLSVRLKYV KLGYHYLISH AMYLFLIPIL MALFAHLSTI TMEDMVQLWN QLKFNLVTVI LCSALIVFLA TLYFMTRPRK
101: VYLVDFSCYK PKPEVMCPKE LFMERSKLAG IFTEENLAFQ KKILERSGLG QKTYFPEALL KLPPNPCMAE ARKEAEMVMF GAIDELLEKT GVKAKDIGIL
201: VVNCSLFNPT PSLSAMIVNH YKLRGNILSY NLGGMGCSAG LISIDLAKQM LQVQPNSYAL VVSMENITLN WYFGNNRSML VSNCIFRMGG AAILLSNKSS
301: DRKRSKYQLI HTVRTHKGAD DKSYGCVFQE EDDNKKIGVA LSKDLMAVAG EALKTNITTL GPIVLPMSEQ LLFFATLVAR KVLKMKIKPY IPDFKLAFEH
401: FCIHAGGRAV LDELEKNLEL SEWHMEPSRM TLYRFGNTSS SSLWYELAYT EAKGRIKKGD RTWQIAFGSG FKCNSAVWCA LRTINPAKEK NPWMDEIDEF
501: PVEVPRVVTI NDS

Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)

001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI

Arabidopsis Description

KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.