Factsheet for TraesCS6A01G073300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	endoplasmic reticulum, peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	96.85	95.91
TraesCS4A01G164400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	94.88	94.14
TraesCS6D01G071600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	97.64	91.01
Os11t0591200-01	Rice	mitochondrion	71.06	83.56
KXG28804	Sorghum	plastid	80.71	78.54
Zm00001d048953_P001	Maize	mitochondrion, plastid	79.13	78.36
CDX94721	Canola	cytosol	59.06	75.76
CDY63070	Canola	cytosol	52.17	72.01
VIT_05s0020g04540.t01	Wine grape	plasma membrane	70.67	68.91
KRH34362	Soybean	plasma membrane	69.29	68.09
CDX89834	Canola	plasma membrane	69.29	67.56
KRG92437	Soybean	plasma membrane	68.7	67.5
Solyc03g005320.2.1	Tomato	plasma membrane	68.9	67.44
PGSC0003DMT400034973	Potato	plasma membrane	68.7	67.24
KRH69063	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	68.9	67.18
Solyc09g083050.2.1	Tomato	plasma membrane	67.72	67.06
KRH31633	Soybean	endoplasmic reticulum, nucleus, plastid	67.91	66.73
Bra015296.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	69.09	66.35
PGSC0003DMT400015633	Potato	plasma membrane	67.91	66.22
CDY18212	Canola	plasma membrane	68.9	66.16
PGSC0003DMT400042065	Potato	cytosol	48.23	65.86
TraesCS7A01G372300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	68.11	65.78
Bra033694.1-P	Field mustard	golgi, peroxisome, plastid	67.72	65.4
AT1G04220.1	Thale cress	plasma membrane	67.72	65.15
CDY14892	Canola	endoplasmic reticulum, golgi, plastid	67.32	65.02
AT5G43760.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	67.52	64.84
Bra035992.1-P	Field mustard	plasma membrane	67.13	64.83
CDX96912	Canola	endoplasmic reticulum, golgi, plastid	67.13	64.71
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	67.52	64.47
TraesCS1A01G413400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	64.96	63.46
GSMUA_Achr3P15310_001	Banana	cytosol, nucleus, plastid	58.86	61.27
PGSC0003DMT400041959	Potato	endoplasmic reticulum, golgi, vacuole	51.97	60.14
TraesCS6A01G177700.1	Wheat	plastid	66.14	58.64
Solyc06g053870.2.1	Tomato	mitochondrion	55.91	58.44
Solyc05g013220.2.1	Tomato	endoplasmic reticulum, golgi, plastid	56.69	58.42
PGSC0003DMT400014188	Potato	endoplasmic reticulum, golgi, plasma membrane	56.69	58.42
TraesCS1A01G406200.1	Wheat	plasma membrane	59.45	57.85
PGSC0003DMT400042071	Potato	plasma membrane	55.51	57.79
PGSC0003DMT400041960	Potato	endoplasmic reticulum, golgi, vacuole	50.39	57.14
TraesCS4A01G065300.1	Wheat	mitochondrion, plasma membrane	55.51	56.85
Solyc06g053900.2.1	Tomato	cytosol, plasma membrane, plastid	54.53	55.96
TraesCS7A01G032900.1	Wheat	cytosol	37.8	55.49
TraesCS6A01G415500.2	Wheat	mitochondrion	54.33	54.65
KRH04744	Soybean	endoplasmic reticulum, plasma membrane, vacuole	50.0	54.39
TraesCS4A01G025300.1	Wheat	golgi	54.33	54.22
TraesCS1A01G392800.1	Wheat	plasma membrane	49.21	53.76
KRH57768	Soybean	plasma membrane	49.21	53.3
TraesCS6A01G293700.1	Wheat	golgi, plasma membrane	50.2	52.69
TraesCS1A01G369100.1	Wheat	golgi	51.57	51.98
TraesCS4A01G068400.1	Wheat	peroxisome	54.33	51.02
TraesCS4A01G303900.1	Wheat	plasma membrane	48.23	49.8
TraesCS7A01G205700.1	Wheat	golgi	47.64	49.29
TraesCS7A01G532300.1	Wheat	golgi	46.46	49.27
TraesCS4A01G031500.1	Wheat	plasma membrane	45.67	48.03
TraesCS7A01G108300.1	Wheat	plasma membrane	41.93	47.54
TraesCS4A01G456600.1	Wheat	plasma membrane	42.32	47.46
TraesCS3A01G451100.1	Wheat	plasma membrane	45.67	47.44
TraesCS7A01G205800.1	Wheat	endoplasmic reticulum, golgi, vacuole	41.93	47.33
TraesCS1A01G040900.1	Wheat	golgi	43.9	46.65
TraesCS6A01G341400.1	Wheat	golgi	46.06	46.52
TraesCS6A01G024400.1	Wheat	plasma membrane	44.69	46.42
TraesCS7A01G206000.1	Wheat	golgi	44.49	45.84
TraesCS2A01G014600.1	Wheat	plasma membrane	44.69	45.77
TraesCS4A01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	48.43	45.56
TraesCS1A01G037600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	43.5	45.29
TraesCS2A01G507700.1	Wheat	golgi, plasma membrane	40.75	45.2
TraesCS5A01G076500.1	Wheat	golgi	43.11	44.6
TraesCS6A01G025200.1	Wheat	plasma membrane	42.32	44.15
TraesCS3A01G279400.1	Wheat	plasma membrane	40.75	42.33
TraesCS7A01G532200.1	Wheat	cytosol	8.66	42.31
TraesCS7A01G107700.1	Wheat	mitochondrion, plastid	41.14	42.05
TraesCS7A01G108000.1	Wheat	golgi, plasma membrane, plastid	39.17	41.46
TraesCS7A01G107900.1	Wheat	golgi, mitochondrion	38.58	41.09
TraesCS1A01G439000.1	Wheat	plasma membrane	38.58	39.2
TraesCS1A01G413000.1	Wheat	golgi	7.68	17.65

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF62	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS6A01G073300	EnsemblPlants:TraesCS6A01G073300.1
TIGR:cd00831	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:40217374..40221937

Molecular Weight (calculated)

55565.4 Da

IEP (calculated)

9.566

GRAVY (calculated)

-0.014

Length

508 amino acids

Sequence
(BLAST)

001: MSAAAQETTA GGGDGKRQGY LKLGYHMVVS NAVYVLLAPF AAALALRASR LTPSDLAAAR AHLLANLQPA VSLVCVATAL ATAYLARRPR AVYLLDFACY
101: KPGPDHVVTR ETFMRQSSKA GAFTDDNLAF QRKILERSGL GQGTYFPAAV LNSPPNPCMA EARREAEAVM FGAIDSLLAK TGVPARDIGV VVVNCSLFNP
201: TPSLSAMVVN HYKLRGNVAS YNLGGMGCSA GLISIDLAKQ LLQVHRNSYA LVVSMENITL NWYWGNDRSM LMSNCLFRMG GAAILLSNRA ADKRRSKYQL
301: MHTVRTHHGA DDRAYRCVFQ EEDKAGRVGV ALSKDLMAVA GEALKTNITT LGPLVLPMSE QILFLSSLIG KKIFGLKMKP YIPDFKMAFE HFCIHAGGRA
401: VLDTIEKSLE LSEWHMEPSR MTLNRWGNTS SSSLWYELAY TEAKGRVRCG HRAWQIAFGS GFKCNSAVWR ALKDIHPSKE AGSNPWIEEI HRFPVEVPKV
501: ESVVSSPC

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.