Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- golgi 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G089800.1 | Wheat | golgi | 93.08 | 93.46 |
| TraesCS2A01G507700.1 | Wheat | golgi, plasma membrane | 59.88 | 64.19 |
| TraesCS7A01G107900.1 | Wheat | golgi, mitochondrion | 60.08 | 61.84 |
| TraesCS7A01G108000.1 | Wheat | golgi, plasma membrane, plastid | 59.06 | 60.42 |
| TraesCS7A01G107700.1 | Wheat | mitochondrion, plastid | 59.88 | 59.15 |
| TraesCS7A01G032900.1 | Wheat | cytosol | 40.73 | 57.8 |
| TraesCS4A01G031500.1 | Wheat | plasma membrane | 56.82 | 57.76 |
| TraesCS6A01G293700.1 | Wheat | golgi, plasma membrane | 56.62 | 57.44 |
| TraesCS7A01G205700.1 | Wheat | golgi | 56.62 | 56.62 |
| TraesCS1A01G392800.1 | Wheat | plasma membrane | 53.16 | 56.13 |
| TraesCS4A01G303900.1 | Wheat | plasma membrane | 56.01 | 55.89 |
| TraesCS7A01G532300.1 | Wheat | golgi | 53.16 | 54.49 |
| TraesCS7A01G205800.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 49.9 | 54.44 |
| TraesCS7A01G108300.1 | Wheat | plasma membrane | 49.29 | 54.02 |
| TraesCS4A01G456600.1 | Wheat | plasma membrane | 49.29 | 53.42 |
| TraesCS3A01G451100.1 | Wheat | plasma membrane | 52.55 | 52.76 |
| TraesCS7A01G206000.1 | Wheat | golgi | 52.95 | 52.74 |
| TraesCS1A01G040900.1 | Wheat | golgi | 51.32 | 52.72 |
| TraesCS1A01G037600.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 50.71 | 51.02 |
| TraesCS3A01G279400.1 | Wheat | plasma membrane | 50.71 | 50.92 |
| TraesCS6A01G341400.1 | Wheat | golgi | 52.14 | 50.89 |
| TraesCS6A01G025200.1 | Wheat | plasma membrane | 49.49 | 49.9 |
| TraesCS7A01G532200.1 | Wheat | cytosol | 10.39 | 49.04 |
| PGSC0003DMT400037757 | Potato | plastid | 46.03 | 49.02 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 38.7 | 48.84 |
| KRH35956 | Soybean | plasma membrane | 49.29 | 48.79 |
| TraesCS2A01G014600.1 | Wheat | plasma membrane | 49.29 | 48.79 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 49.08 | 48.59 |
| TraesCS6A01G024400.1 | Wheat | plasma membrane | 48.27 | 48.47 |
| TraesCS4A01G065300.1 | Wheat | mitochondrion, plasma membrane | 48.88 | 48.39 |
| Bra004034.1-P | Field mustard | plasma membrane | 48.47 | 48.37 |
| CDY04232 | Canola | plasma membrane | 48.88 | 48.29 |
| CDY07381 | Canola | plasma membrane | 48.68 | 48.09 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 48.07 | 47.97 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 47.66 | 47.37 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 47.66 | 47.18 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 47.45 | 46.98 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 47.45 | 46.98 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 47.25 | 46.96 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 47.25 | 46.77 |
| AT1G68530.1 | Thale cress | plasma membrane | 47.25 | 46.68 |
| Bra024749.1-P | Field mustard | plasma membrane | 47.25 | 46.68 |
| CDY42109 | Canola | plasma membrane | 47.25 | 46.68 |
| AT1G25450.1 | Thale cress | plasma membrane | 46.64 | 46.54 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 46.84 | 46.37 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 45.82 | 45.73 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 38.9 | 45.48 |
| Solyc02g063140.2.1 | Tomato | golgi | 45.82 | 45.36 |
| TraesCS1A01G439000.1 | Wheat | plasma membrane | 45.82 | 45.0 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 46.84 | 44.32 |
| TraesCS6A01G073300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 44.6 | 43.11 |
| TraesCS1A01G406200.1 | Wheat | plasma membrane | 45.42 | 42.72 |
| TraesCS1A01G413400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 45.21 | 42.69 |
| TraesCS7A01G372300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.21 | 42.21 |
| TraesCS4A01G164400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 43.99 | 42.19 |
| TraesCS4A01G025300.1 | Wheat | golgi | 41.34 | 39.88 |
| TraesCS1A01G369100.1 | Wheat | golgi | 40.94 | 39.88 |
| TraesCS6A01G415500.2 | Wheat | mitochondrion | 40.53 | 39.41 |
| TraesCS6A01G177700.1 | Wheat | plastid | 43.38 | 37.17 |
| TraesCS4A01G068400.1 | Wheat | peroxisome | 40.94 | 37.15 |
| TraesCS4A01G007400.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.31 | 35.74 |
| TraesCS1A01G413000.1 | Wheat | golgi | 6.31 | 14.03 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF18 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS5A01G076500 | EnsemblPlants:TraesCS5A01G076500.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:92196099..92197574
Molecular Weight (calculated)
54402.5 Da
IEP (calculated)
8.399
GRAVY (calculated)
0.110
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSLSDLKHL KRLYYLATNK FLLMATTITL AAAVLLLQAA QRIAPIDELL SQLRDLQPIN LLLAAILPTA MLRIYSYLIR HPRNVYLVDY ACFRTSYKYR
101: APKATFLEHA HISPFFGEST TKFIERVIER SGMGEDTLVP PALYYVEPDC SLDEGRSEAE MVIFSTIDDL LAKTCIALDA IHVLITNCSL FCPVPSIADR
201: IVNGYALRDD IRVINLSGMG CSAGVTAVGL AKNMLQIIPS GSHVLVVSTE TLGPQYYKGN VRSMHLGNIL FRVGGSAMLL STCKHKARFK LAHVERTLVG
301: ADDAAYRCVY QEDDPEGNIG LTLSKDLMAI AGETLKANMT AIGPLVLPTS ELIKYLFSMA RKVLHRRKIR PYIPDFRMAF EHFCIHVGGP AVIDSVQLGL
401: SLSDEHVEPS RMTLHRFGNQ SSASVWYQLA YIEDKGRMRK GDRVWMIGFG AGYKCNTAVW VCIQPSPNAN GSWASCIHRY PVDVSKEGGS A
101: APKATFLEHA HISPFFGEST TKFIERVIER SGMGEDTLVP PALYYVEPDC SLDEGRSEAE MVIFSTIDDL LAKTCIALDA IHVLITNCSL FCPVPSIADR
201: IVNGYALRDD IRVINLSGMG CSAGVTAVGL AKNMLQIIPS GSHVLVVSTE TLGPQYYKGN VRSMHLGNIL FRVGGSAMLL STCKHKARFK LAHVERTLVG
301: ADDAAYRCVY QEDDPEGNIG LTLSKDLMAI AGETLKANMT AIGPLVLPTS ELIKYLFSMA RKVLHRRKIR PYIPDFRMAF EHFCIHVGGP AVIDSVQLGL
401: SLSDEHVEPS RMTLHRFGNQ SSASVWYQLA YIEDKGRMRK GDRVWMIGFG AGYKCNTAVW VCIQPSPNAN GSWASCIHRY PVDVSKEGGS A
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.