Factsheet for TraesCS6A01G415500.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G473900.1	Wheat	mitochondrion	96.44	96.63
Os10t0416200-01	Rice	cytosol, mitochondrion	83.56	80.69
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	73.66	75.15
TraesCS4A01G025300.1	Wheat	golgi	74.85	74.26
Zm00001d014168_P001	Maize	peroxisome, plasma membrane, plastid	73.66	73.66
EER91618	Sorghum	plastid	74.65	71.95
TraesCS1A01G369100.1	Wheat	golgi	66.34	66.47
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	46.53	58.9
TraesCS6A01G073300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	54.65	54.33
TraesCS1A01G413400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	54.26	52.69
TraesCS7A01G372300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	54.85	52.66
TraesCS4A01G164400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	53.07	52.34
TraesCS7A01G032900.1	Wheat	cytosol	34.85	50.87
TraesCS1A01G406200.1	Wheat	plasma membrane	51.09	49.43
TraesCS4A01G065300.1	Wheat	mitochondrion, plasma membrane	48.32	49.19
TraesCS1A01G392800.1	Wheat	plasma membrane	44.36	48.17
TraesCS6A01G293700.1	Wheat	golgi, plasma membrane	45.54	47.52
TraesCS6A01G177700.1	Wheat	plastid	53.66	47.29
TraesCS4A01G303900.1	Wheat	plasma membrane	44.95	46.14
TraesCS7A01G532300.1	Wheat	golgi	43.17	45.51
TraesCS4A01G068400.1	Wheat	peroxisome	48.32	45.1
TraesCS4A01G031500.1	Wheat	plasma membrane	42.77	44.72
TraesCS7A01G205700.1	Wheat	golgi	42.97	44.2
TraesCS4A01G456600.1	Wheat	plasma membrane	39.6	44.15
TraesCS1A01G040900.1	Wheat	golgi	40.99	43.31
TraesCS7A01G108300.1	Wheat	plasma membrane	37.82	42.63
TraesCS7A01G205800.1	Wheat	endoplasmic reticulum, golgi, vacuole	37.82	42.44
TraesCS3A01G451100.1	Wheat	plasma membrane	40.99	42.33
TraesCS7A01G206000.1	Wheat	golgi	40.99	41.99
TraesCS4A01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	44.36	41.48
TraesCS6A01G025200.1	Wheat	plasma membrane	40.0	41.48
TraesCS1A01G037600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	39.8	41.19
TraesCS2A01G014600.1	Wheat	plasma membrane	40.4	41.13
TraesCS6A01G024400.1	Wheat	plasma membrane	39.6	40.9
TraesCS5A01G076500.1	Wheat	golgi	39.41	40.53
TraesCS3A01G279400.1	Wheat	plasma membrane	39.21	40.49
TraesCS2A01G507700.1	Wheat	golgi, plasma membrane	36.63	40.39
TraesCS6A01G341400.1	Wheat	golgi	40.2	40.36
TraesCS7A01G532200.1	Wheat	cytosol	8.12	39.42
TraesCS7A01G107700.1	Wheat	mitochondrion, plastid	37.62	38.23
TraesCS1A01G439000.1	Wheat	plasma membrane	37.43	37.8
TraesCS7A01G107900.1	Wheat	golgi, mitochondrion	35.45	37.53
TraesCS7A01G108000.1	Wheat	golgi, plasma membrane, plastid	34.85	36.67
TraesCS1A01G413000.1	Wheat	golgi	7.92	18.1

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF16	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS6A01G415500	EnsemblPlants:TraesCS6A01G415500.2
TIGR:cd00831	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:615128941..615132411

Molecular Weight (calculated)

56054.0 Da

IEP (calculated)

9.234

GRAVY (calculated)

-0.003

Length

505 amino acids

Sequence
(BLAST)

001: MEYRQLVRTV KQATRNHAGL MYHRLVSHIP HVLVVTVLVV VAPQLSTLTP EKARALWNTA VNAPALAMAC WAAALAAYTY ASSRPQPVYL VDLAGYKPPV
101: ELEASRAKTI VHFSRCGRFS EQSMAFQKRM LERSGLGEAT HFPMSLIRLP VDMCDRTAME ESHAVIFGVV DEVLRKTGVD AGDVGVLIFN SSLLSPTPSF
201: TSLIVNRYRF RDDVVTHNLS GMGCSAGIIA IDLAKRLLQV HRNTYALVVS TENITLNAYM GNNRPMLVTN TLFRVGGAAI LLTNRAGDRA RSKYQLIHTV
301: RTHRGAHDQS YGCVTQEEDE VGEVGVSLSK ELMAVAGEAL KTNITTLGPL ILPMSEQLRF LATVVLKKVF RAQVKAYLPD FKLALEHFCI HAGGRGVLDE
401: LENSLKLSPW HMEPSRMTLY RFGNTSSSSL WYELAYCEAK RRIKKGDRVW QIAFGSGFKC NSAVWRALRT IDDAGESPWT QDVHVLPVDV PKVVPIDETS
501: YQVPI

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.