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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 4
  • cytosol 1
  • extracellular 3
  • vacuole 3
  • plasma membrane 5
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g009270.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 95.55 95.55
PGSC0003DMT400032993 Potato plasma membrane 76.52 76.21
PGSC0003DMT400062136 Potato cytosol, golgi, plasma membrane 74.7 74.4
PGSC0003DMT400037757 Potato plastid 68.42 73.32
GSMUA_Achr2P21590_001 Banana golgi, peroxisome, plastid 56.68 72.54
GSMUA_Achr3P02180_001 Banana plasma membrane 51.62 72.24
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi, plasma membrane 64.57 72.01
EER92628 Sorghum plasma membrane 70.45 70.45
Os03t0220100-01 Rice golgi, mitochondrion 70.24 70.24
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 69.84 69.84
TraesCS4D01G242200.1 Wheat mitochondrion, plasma membrane 69.43 69.15
TraesCS4A01G065300.1 Wheat mitochondrion, plasma membrane 69.03 68.75
GSMUA_Achr3P07400_001 Banana plasma membrane 53.85 68.38
HORVU4Hr1G067340.2 Barley golgi 69.23 68.26
Zm00001d048061_P001 Maize golgi 67.41 67.41
Zm00001d045660_P001 Maize mitochondrion 39.47 67.01
GSMUA_Achr8P30930_001 Banana endoplasmic reticulum, extracellular 51.82 66.32
Zm00001d037328_P001 Maize cytosol 48.18 64.85
GSMUA_Achr5P05870_001 Banana plasma membrane 51.01 60.0
PGSC0003DMT400042065 Potato cytosol 45.14 59.95
TraesCS7A01G205700.1 Wheat golgi 58.3 58.66
TraesCS7B01G113000.1 Wheat golgi 58.3 58.66
TraesCS7D01G208500.1 Wheat golgi 58.5 58.5
Zm00001d051787_P001 Maize mitochondrion 57.29 58.35
KXG30818 Sorghum golgi, mitochondrion 57.09 57.91
TraesCS4D01G008100.1 Wheat plasma membrane 50.0 57.71
TraesCS1B01G421100.1 Wheat golgi 54.05 57.54
TraesCS7A01G032900.1 Wheat cytosol 40.28 57.51
TraesCS6D01G274600.1 Wheat golgi, plasma membrane 56.28 57.44
TraesCS1D01G401000.1 Wheat plasma membrane 53.85 57.33
HORVU6Hr1G073300.1 Barley golgi, plasma membrane 56.07 57.23
TraesCS1A01G392800.1 Wheat plasma membrane 53.85 57.2
TraesCS4B01G274700.1 Wheat plastid 55.47 57.2
PGSC0003DMT400009451 Potato cytosol, peroxisome, plasma membrane 59.92 57.03
TraesCS6A01G293700.1 Wheat golgi, plasma membrane 55.87 57.02
HORVU0Hr1G038430.1 Barley endoplasmic reticulum, plasma membrane 53.04 56.96
TraesCS4A01G031500.1 Wheat plasma membrane 55.67 56.94
TraesCS6B01G324200.1 Wheat plasma membrane 55.67 56.82
Zm00001d017941_P001 Maize plasma membrane 56.68 56.8
TraesCS4D01G273400.1 Wheat endoplasmic reticulum 55.47 56.73
PGSC0003DMT400019029 Potato plasma membrane 57.89 56.63
PGSC0003DMT400067205 Potato peroxisome 58.7 56.53
KXG19727 Sorghum mitochondrion, plastid 56.28 56.39
Os02t0731900-01 Rice plasma membrane 56.88 56.09
TraesCS4A01G303900.1 Wheat plasma membrane 55.47 55.69
PGSC0003DMT400002734 Potato cytosol, peroxisome, plasma membrane 57.49 55.58
TraesCS7D01G208600.1 Wheat cytosol 42.91 55.5
TraesCSU01G166100.1 Wheat plasma membrane 55.26 55.49
TraesCS7D01G519300.1 Wheat golgi, plasma membrane 53.44 55.23
Os06t0262800-01 Rice plasma membrane 55.06 55.06
TraesCS7D01G035700.1 Wheat plasma membrane 54.05 55.05
TraesCS7A01G532300.1 Wheat golgi 53.24 54.91
TraesCS7D01G519400.1 Wheat plasma membrane 53.24 54.91
PGSC0003DMT400015633 Potato plasma membrane 57.89 54.89
HORVU7Hr1G006910.1 Barley plasma membrane 54.05 54.83
EER89559 Sorghum mitochondrion, plasma membrane 54.25 54.69
PGSC0003DMT400034973 Potato plasma membrane 57.29 54.53
TraesCS7A01G532200.1 Wheat cytosol 11.34 53.85
TraesCS7B01G449300.1 Wheat plasma membrane 51.62 53.35
KXG19733 Sorghum endoplasmic reticulum, plasma membrane, vacuole 51.82 53.22
TraesCS7D01G209400.1 Wheat cytosol 40.08 52.94
TraesCS3B01G488500.1 Wheat plasma membrane 52.43 52.86
PGSC0003DMT400041959 Potato endoplasmic reticulum, golgi, vacuole 46.96 52.85
TraesCS7B01G449000.1 Wheat golgi 52.02 52.77
HORVU1Hr1G086760.1 Barley cytosol 53.64 52.48
TraesCS3D01G444000.1 Wheat golgi 51.82 52.35
TraesCS7D01G029500.1 Wheat plasma membrane 48.38 52.3
TraesCS7D01G089200.1 Wheat endoplasmic reticulum, plasma membrane 49.6 51.8
TraesCS3A01G451100.1 Wheat plasma membrane 51.21 51.74
PGSC0003DMT400042071 Potato plasma membrane 51.01 51.64
PGSC0003DMT400014188 Potato endoplasmic reticulum, golgi, plasma membrane 51.42 51.52
TraesCS6A01G341400.1 Wheat golgi 52.43 51.49
TraesCS4A01G456600.1 Wheat plasma membrane 47.17 51.43
HORVU3Hr1G097570.1 Barley golgi 50.81 51.33
PGSC0003DMT400028047 Potato plasma membrane 55.47 51.22
TraesCS6B01G373000.1 Wheat endoplasmic reticulum, golgi 43.12 51.08
PGSC0003DMT400041960 Potato endoplasmic reticulum, golgi, vacuole 46.15 50.89
TraesCS7A01G108300.1 Wheat plasma membrane 46.15 50.89
EER88189 Sorghum endoplasmic reticulum, plasma membrane, vacuole 49.6 50.83
TraesCS7D01G102300.1 Wheat mitochondrion 29.76 50.69
TraesCS2D01G508000.1 Wheat mitochondrion 32.59 50.63
HORVU7Hr1G023540.1 Barley mitochondrion 29.15 50.53
TraesCS3A01G279400.1 Wheat plasma membrane 50.0 50.51
EER89567 Sorghum endoplasmic reticulum, golgi, plastid 46.56 50.44
TraesCS1A01G040900.1 Wheat golgi 48.79 50.42
TraesCS1D01G042300.1 Wheat golgi 48.79 50.42
TraesCS3D01G279300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.6 50.31
TraesCS6D01G321600.1 Wheat golgi 51.21 50.3
OQU76197 Sorghum golgi 48.58 50.1
TraesCS6B01G372900.1 Wheat golgi 51.01 50.1
EES03073 Sorghum endoplasmic reticulum, golgi, plasma membrane 49.6 50.0
Os01t0529800-01 Rice plasma membrane 48.38 50.0
TraesCS1A01G037600.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.39 50.0
Zm00001d009354_P001 Maize endoplasmic reticulum 49.19 50.0
HORVU6Hr1G082270.1 Barley golgi 51.42 49.61
HORVU7Hr1G042040.1 Barley golgi 49.8 49.6
TraesCS2A01G014600.1 Wheat plasma membrane 49.8 49.6
EES00849 Sorghum endoplasmic reticulum, golgi 49.6 49.6
HORVU6Hr1G094160.2 Barley endoplasmic reticulum, golgi, plasma membrane 49.19 49.59
TraesCS6B01G036000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.79 49.39
TraesCS7B01G113200.1 Wheat golgi 49.6 49.3
TraesCS7A01G206000.1 Wheat golgi 49.19 49.29
TraesCS1D01G039200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.38 49.18
TraesCS7D01G208800.1 Wheat endoplasmic reticulum 48.18 49.07
HORVU6Hr1G004830.1 Barley golgi 49.19 48.99
TraesCS1B01G048000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.38 48.98
HORVU7Hr1G023280.1 Barley plasma membrane 44.74 48.89
TraesCS7A01G205800.1 Wheat endoplasmic reticulum, golgi, vacuole 44.53 48.89
TraesCS7B01G113100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 44.53 48.89
TraesCS5D01G089800.1 Wheat golgi 48.38 48.88
TraesCS6A01G024400.1 Wheat plasma membrane 48.38 48.88
TraesCS1B01G053700.1 Wheat endoplasmic reticulum 48.99 48.69
Zm00001d044580_P001 Maize mitochondrion 47.98 48.67
TraesCS3B01G313800.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.6 48.42
Os06t0260500-00 Rice mitochondrion 51.42 48.2
HORVU7Hr1G042050.1 Barley golgi 47.37 48.05
TraesCS5A01G076500.1 Wheat golgi 47.37 47.66
TraesCS6A01G025200.1 Wheat plasma membrane 46.96 47.64
TraesCS7D01G208700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 44.33 47.4
TraesCS2D01G508200.1 Wheat plasma membrane, plastid 43.93 47.38
TraesCS7D01G102900.1 Wheat golgi, plasma membrane, plastid 45.95 47.29
TraesCS7B01G006100.1 Wheat mitochondrion 46.56 47.23
TraesCS4D01G008200.1 Wheat plasma membrane 46.76 46.95
TraesCS2D01G508300.1 Wheat endoplasmic reticulum, plasma membrane 43.72 46.85
Zm00001d044579_P001 Maize golgi 46.76 46.76
TraesCS2B01G535600.1 Wheat golgi, mitochondrion 45.75 46.6
TraesCS7D01G102800.1 Wheat endoplasmic reticulum, plasma membrane, plastid 42.31 46.55
TraesCS2B01G535700.1 Wheat endoplasmic reticulum, plasma membrane 42.91 46.29
TraesCS7A01G108000.1 Wheat golgi, plasma membrane, plastid 44.94 46.25
HORVU7Hr1G022720.1 Barley plasma membrane 33.6 46.24
TraesCS2A01G507700.1 Wheat golgi, plasma membrane 42.71 46.07
TraesCS7D01G102400.1 Wheat endoplasmic reticulum, plastid, vacuole 44.53 45.83
HORVU3Hr1G069880.2 Barley mitochondrion, plastid 49.6 45.71
HORVU5Hr1G087530.1 Barley plasma membrane 44.94 45.68
PGSC0003DMT400019063 Potato cytosol, peroxisome, plasma membrane 49.8 45.56
HORVU5Hr1G122360.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 45.55 45.55
TraesCS1A01G439000.1 Wheat plasma membrane 45.95 45.4
HORVU2Hr1G112840.1 Barley endoplasmic reticulum, golgi 42.91 45.3
TraesCS7B01G006300.1 Wheat golgi 44.33 44.97
HORVU7Hr1G022780.1 Barley golgi, mitochondrion 42.31 44.09
TraesCS7D01G102000.1 Wheat mitochondrion, plastid 44.13 43.86
TraesCS5D01G017000.1 Wheat endoplasmic reticulum, golgi, plastid 41.9 43.86
TraesCS7A01G107900.1 Wheat golgi, mitochondrion 42.31 43.82
TraesCS7A01G107700.1 Wheat mitochondrion, plastid 43.93 43.66
HORVU7Hr1G030880.1 Barley plasma membrane 43.32 42.89
HORVU7Hr1G022580.1 Barley golgi, mitochondrion 31.17 42.19
PGSC0003DMT400049683 Potato endoplasmic reticulum, golgi 37.85 42.02
PGSC0003DMT400051894 Potato endoplasmic reticulum, plasma membrane 33.6 36.73
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199EntrezGene:102579720InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
InterPro:ACP_syn_III_CInterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629
GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039UniProt:M1B5R9
PFAM:PF08392PFAM:PF08541EnsemblPlantsGene:PGSC0003DMG400014549PGSC:PGSC0003DMG400014549EnsemblPlants:PGSC0003DMT400037714PIRSF:PIRSF036417
PANTHER:PTHR31561PANTHER:PTHR31561:SF5SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0002958A8E
RefSeq:XP_006344142.1:::::
Description
3-ketoacyl-CoA synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400014549]
Coordinates
chr5:+:2963585..2969054
Molecular Weight (calculated)
55736.4 Da
IEP (calculated)
8.737
GRAVY (calculated)
0.073
Length
494 amino acids
Sequence
(BLAST)
001: MPENSHSIKL RYVKLCYQYL VNNILTFLLV PIMATILIQF LQSNPNELLN FYNSLSFTSI HLVCSLFLIS YVTTCYIMSR PRTIYLVDYA CFLPPITCRI
101: PFASFMEHAH LILSSEPKSV RFQMKILERS GLSEETALPP AMHYIPPTPT MDLAREEAEL VIFSAMDSLL AKTGLKPKDI DVLVVNCSLF SPTPSLSAMV
201: INKYRLRSNI KSFNLSGMGC SAGVISIDLA RDILQQYPNS NAVVISTEIL TPNGYLGKER SMLLTNCLFR MGGAAILLSN RKSDRARAKY RLVHIVRTHK
301: GADDKSFRCV QQQEDPEGKV GINLCIDLMQ VAGEALKSNI TTIGPLVLPA SEQLLFLLTL ICRKLFKSKM KPYIPDFKLA FEHFCIHAGG RAVIDELQNN
401: LQLSAEHVEA SRMALYRFGN TSSSSLWYEM SYIEAKGRMK KGDRIWQIAF GSGFKCNSAV WKCNRTIKLP VDDHNPWADC IDRYPVDIPE VVRL
Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.