Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G040900.1 | Wheat | golgi | 96.44 | 96.44 |
| TraesCS1B01G053700.1 | Wheat | endoplasmic reticulum | 96.23 | 92.56 |
| TraesCS7D01G208600.1 | Wheat | cytosol | 63.39 | 79.32 |
| TraesCS7D01G208800.1 | Wheat | endoplasmic reticulum | 76.78 | 75.67 |
| TraesCS7D01G208700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 71.34 | 73.81 |
| TraesCS1D01G039200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 74.9 | 73.66 |
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 55.23 | 61.68 |
| OQU76197 | Sorghum | golgi | 61.51 | 61.38 |
| TraesCS7D01G208500.1 | Wheat | golgi | 63.39 | 61.34 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 61.72 | 60.95 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 56.28 | 57.97 |
| TraesCS7D01G035700.1 | Wheat | plasma membrane | 58.37 | 57.53 |
| TraesCS4D01G273400.1 | Wheat | endoplasmic reticulum | 57.95 | 57.35 |
| TraesCS3D01G444000.1 | Wheat | golgi | 58.58 | 57.26 |
| TraesCS7D01G519300.1 | Wheat | golgi, plasma membrane | 56.49 | 56.49 |
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 55.65 | 55.53 |
| TraesCS6D01G321600.1 | Wheat | golgi | 57.74 | 54.87 |
| TraesCS7D01G029500.1 | Wheat | plasma membrane | 52.09 | 54.49 |
| TraesCS7D01G209400.1 | Wheat | cytosol | 42.47 | 54.28 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 44.14 | 54.24 |
| TraesCS2D01G508000.1 | Wheat | mitochondrion | 35.56 | 53.46 |
| TraesCS7D01G102300.1 | Wheat | mitochondrion | 32.43 | 53.45 |
| TraesCS5D01G089800.1 | Wheat | golgi | 53.56 | 52.35 |
| TraesCS7D01G089200.1 | Wheat | endoplasmic reticulum, plasma membrane | 51.26 | 51.8 |
| PGSC0003DMT400037757 | Potato | plastid | 49.79 | 51.63 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 53.14 | 51.63 |
| TraesCS7D01G102800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 48.12 | 51.22 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 51.88 | 50.92 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 52.72 | 50.81 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 52.72 | 50.81 |
| TraesCS2D01G508200.1 | Wheat | plasma membrane, plastid | 48.54 | 50.66 |
| KRH35956 | Soybean | plasma membrane | 52.51 | 50.6 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 52.3 | 50.4 |
| TraesCS7D01G102400.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 50.42 | 50.21 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 51.88 | 50.0 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 51.88 | 50.0 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 51.67 | 49.8 |
| TraesCS7D01G102900.1 | Wheat | golgi, plasma membrane, plastid | 50.0 | 49.79 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 43.72 | 49.76 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 51.46 | 49.6 |
| Bra004034.1-P | Field mustard | plasma membrane | 51.05 | 49.59 |
| TraesCS2D01G508300.1 | Wheat | endoplasmic reticulum, plasma membrane | 47.7 | 49.46 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 50.84 | 49.39 |
| CDY04232 | Canola | plasma membrane | 51.26 | 49.3 |
| CDY07381 | Canola | plasma membrane | 51.05 | 49.09 |
| Solyc02g063140.2.1 | Tomato | golgi | 50.84 | 48.99 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 50.63 | 48.99 |
| AT1G25450.1 | Thale cress | plasma membrane | 50.42 | 48.98 |
| Bra024749.1-P | Field mustard | plasma membrane | 50.84 | 48.89 |
| CDY42109 | Canola | plasma membrane | 50.84 | 48.89 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 50.42 | 48.79 |
| AT1G68530.1 | Thale cress | plasma membrane | 50.42 | 48.49 |
| TraesCS4D01G008200.1 | Wheat | plasma membrane | 49.79 | 48.37 |
| TraesCS7D01G102000.1 | Wheat | mitochondrion, plastid | 49.58 | 47.69 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 50.63 | 46.63 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 47.07 | 43.95 |
| TraesCS5D01G017000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 42.47 | 43.01 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 46.65 | 42.97 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.82 | 42.03 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 47.28 | 41.47 |
| TraesCS4D01G277300.1 | Wheat | golgi | 44.14 | 41.45 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 45.4 | 41.41 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 45.19 | 41.14 |
| TraesCS1D01G374700.1 | Wheat | plasma membrane | 42.05 | 39.65 |
| TraesCS4D01G296400.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.56 | 39.44 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 42.26 | 37.48 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 6.07 | 13.12 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF64 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS1D01G042300 | EnsemblPlants:TraesCS1D01G042300.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:20826224..20827660
Molecular Weight (calculated)
52643.3 Da
IEP (calculated)
9.211
GRAVY (calculated)
0.159
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKHLKPLY QLVVNNFRIV VVAPVTAVVL LRNAAPLGPD ELLSRLHGLR QVHVFLAVFL PFAIATLYLM RRPRSVYLVD YACCRPKSNC RVSIASFIES
101: ARLSPYIDDG TFHFMTRMLQ RSGLGDQTYL HPSLHHIPPH CCLSESRDEA EQIIFATVDD LLAKTGISPA AIDILVTNCS GFTPTPSFTD IIVNKYKLRG
201: DIRNVNMSGM GCSAGVISLD VARSLLQAAP RGAHALVVSM EVTSFIYYTG PDRTMLLPGA LFRMGAAAVL LSTSRAKSRL RLTHIVRTLN AAKDRAYLCA
301: SLKEDEHGET GIYLSKDLVP VAGETLKANI AALGSVVLPP SEKLLFALSF IARKALGRRI KLYVPDFHMA FEHFCVHSGG RAVIDAVQTS LCLSDENVEP
401: SRMTLHRFGN TSSSSLWYEL AYIEAKGRMR KGDRVWMVGF GSGFKCNSAV WECIRSPSDV TTLGAPWADS IHQYPVKI
101: ARLSPYIDDG TFHFMTRMLQ RSGLGDQTYL HPSLHHIPPH CCLSESRDEA EQIIFATVDD LLAKTGISPA AIDILVTNCS GFTPTPSFTD IIVNKYKLRG
201: DIRNVNMSGM GCSAGVISLD VARSLLQAAP RGAHALVVSM EVTSFIYYTG PDRTMLLPGA LFRMGAAAVL LSTSRAKSRL RLTHIVRTLN AAKDRAYLCA
301: SLKEDEHGET GIYLSKDLVP VAGETLKANI AALGSVVLPP SEKLLFALSF IARKALGRRI KLYVPDFHMA FEHFCVHSGG RAVIDAVQTS LCLSDENVEP
401: SRMTLHRFGN TSSSSLWYEL AYIEAKGRMR KGDRVWMVGF GSGFKCNSAV WECIRSPSDV TTLGAPWADS IHQYPVKI
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.