Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G102300.1 | Wheat | mitochondrion | 65.09 | 71.38 |
| TraesCS2B01G535600.1 | Wheat | golgi, mitochondrion | 86.16 | 56.49 |
| TraesCS7D01G209400.1 | Wheat | cytosol | 63.84 | 54.28 |
| TraesCS2D01G508200.1 | Wheat | plasma membrane, plastid | 74.53 | 51.75 |
| TraesCS7D01G102800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 69.18 | 49.0 |
| TraesCS2D01G508300.1 | Wheat | endoplasmic reticulum, plasma membrane | 69.5 | 47.94 |
| TraesCS7D01G102000.1 | Wheat | mitochondrion, plastid | 73.27 | 46.88 |
| TraesCS7D01G102400.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 69.18 | 45.83 |
| TraesCS7D01G102900.1 | Wheat | golgi, plasma membrane, plastid | 68.87 | 45.62 |
| TraesCS7D01G208600.1 | Wheat | cytosol | 51.57 | 42.93 |
| TraesCS5D01G089800.1 | Wheat | golgi | 63.21 | 41.1 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 58.8 | 40.3 |
| TraesCS4D01G273400.1 | Wheat | endoplasmic reticulum | 60.69 | 39.96 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 58.8 | 38.64 |
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 57.23 | 38.0 |
| TraesCS7D01G519300.1 | Wheat | golgi, plasma membrane | 56.92 | 37.87 |
| TraesCS7D01G035700.1 | Wheat | plasma membrane | 57.55 | 37.73 |
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 50.31 | 37.38 |
| TraesCS7D01G089200.1 | Wheat | endoplasmic reticulum, plasma membrane | 55.35 | 37.21 |
| TraesCS7D01G029500.1 | Wheat | plasma membrane | 53.46 | 37.2 |
| TraesCS3D01G444000.1 | Wheat | golgi | 56.92 | 37.01 |
| TraesCS7D01G208500.1 | Wheat | golgi | 56.92 | 36.64 |
| TraesCS4D01G008200.1 | Wheat | plasma membrane | 55.97 | 36.18 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 44.03 | 35.99 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 47.48 | 35.95 |
| PGSC0003DMT400037757 | Potato | plastid | 51.89 | 35.79 |
| TraesCS1D01G042300.1 | Wheat | golgi | 53.46 | 35.56 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 53.77 | 35.11 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 53.77 | 34.76 |
| TraesCS6D01G321600.1 | Wheat | golgi | 54.09 | 34.19 |
| TraesCS1D01G039200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 52.2 | 34.16 |
| KRH35956 | Soybean | plasma membrane | 53.14 | 34.07 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 52.83 | 33.87 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 52.83 | 33.87 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 52.52 | 33.67 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 52.2 | 33.47 |
| TraesCS7D01G208800.1 | Wheat | endoplasmic reticulum | 50.94 | 33.4 |
| Bra004034.1-P | Field mustard | plasma membrane | 51.57 | 33.33 |
| AT1G25450.1 | Thale cress | plasma membrane | 51.26 | 33.13 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 51.57 | 33.06 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 51.57 | 33.06 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 51.57 | 33.06 |
| CDY07381 | Canola | plasma membrane | 51.57 | 33.0 |
| CDY04232 | Canola | plasma membrane | 51.57 | 33.0 |
| Bra024749.1-P | Field mustard | plasma membrane | 51.57 | 33.0 |
| CDY42109 | Canola | plasma membrane | 51.57 | 33.0 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 50.94 | 32.93 |
| Solyc02g063140.2.1 | Tomato | golgi | 51.26 | 32.86 |
| AT1G68530.1 | Thale cress | plasma membrane | 50.94 | 32.6 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 50.63 | 32.59 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 50.63 | 32.59 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 51.26 | 31.41 |
| TraesCS7D01G208700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 45.28 | 31.17 |
| TraesCS5D01G017000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 45.6 | 30.72 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 50.31 | 30.48 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 49.06 | 30.47 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 49.37 | 30.25 |
| TraesCS4D01G277300.1 | Wheat | golgi | 47.8 | 29.86 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 48.43 | 29.56 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 48.11 | 29.2 |
| TraesCS1D01G374700.1 | Wheat | plasma membrane | 46.54 | 29.19 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 50.0 | 29.17 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 47.48 | 28.01 |
| TraesCS4D01G296400.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.71 | 25.74 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 7.86 | 11.31 |
Protein Annotations
| KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:FAE1_typ3_polyketide_synth |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0016747 |
| InterPro:IPR016039 | PFAM:PF02797 | PFAM:PF08392 | PANTHER:PTHR31561 | PANTHER:PTHR31561:SF18 | SUPFAM:SSF53901 |
| TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS2D01G508000 | EnsemblPlants:TraesCS2D01G508000.1 | TIGR:cd00831 | : |
Description
No Description!
Coordinates
chr2D:-:601253971..601255084
Molecular Weight (calculated)
35309.9 Da
IEP (calculated)
9.577
GRAVY (calculated)
0.024
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFLPRHAST VMRSVFLSPT AVDYARYHPT PDMIVNRYKL RGDIRLMNLS GMACTASVTA VGIASNMLQV MPWGSYALVV STEIIGPLYY AGNMRSMQLS
101: NILFRMGGAA KLLSTARTKA RFRFEHLAQT ITAANDAAYR CVYQEEDEKG NFGTAFSKDL IGVARDALKE NITVTGPLVL PGSELLRVLL HRMAKKVLSS
201: RRARQYIPSF CLAFEHFCIH VGGPAVITSV QHGLNLSDKH VEASRMTLHR FGNQLSASVW YELAYIEAKG WMNKGNRVWM IGFGAGYECN TVGWICIQPS
301: SSADGPWASC IHRYPVDI
101: NILFRMGGAA KLLSTARTKA RFRFEHLAQT ITAANDAAYR CVYQEEDEKG NFGTAFSKDL IGVARDALKE NITVTGPLVL PGSELLRVLL HRMAKKVLSS
201: RRARQYIPSF CLAFEHFCIH VGGPAVITSV QHGLNLSDKH VEASRMTLHR FGNQLSASVW YELAYIEAKG WMNKGNRVWM IGFGAGYECN TVGWICIQPS
301: SSADGPWASC IHRYPVDI
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.