Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 6
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G032900.1 | Wheat | cytosol | 73.96 | 97.69 |
| TraesCS4A01G456600.1 | Wheat | plasma membrane | 91.68 | 92.49 |
| TraesCS7D01G089200.1 | Wheat | endoplasmic reticulum, plasma membrane | 66.3 | 64.06 |
| TraesCS4D01G008200.1 | Wheat | plasma membrane | 64.77 | 60.16 |
| TraesCS7D01G208600.1 | Wheat | cytosol | 50.11 | 59.95 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 60.83 | 59.91 |
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 55.8 | 59.58 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 62.8 | 59.3 |
| TraesCS4D01G273400.1 | Wheat | endoplasmic reticulum | 60.61 | 57.35 |
| TraesCS7D01G519300.1 | Wheat | golgi, plasma membrane | 59.3 | 56.69 |
| TraesCS7D01G209400.1 | Wheat | cytosol | 46.39 | 56.68 |
| TraesCS3D01G444000.1 | Wheat | golgi | 60.61 | 56.65 |
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 58.86 | 56.16 |
| TraesCS7D01G035700.1 | Wheat | plasma membrane | 59.52 | 56.08 |
| TraesCS7D01G208500.1 | Wheat | golgi | 59.96 | 55.47 |
| TraesCS2D01G508000.1 | Wheat | mitochondrion | 37.2 | 53.46 |
| TraesCS6D01G321600.1 | Wheat | golgi | 57.77 | 52.49 |
| TraesCS7D01G102300.1 | Wheat | mitochondrion | 33.26 | 52.41 |
| TraesCS1D01G042300.1 | Wheat | golgi | 54.49 | 52.09 |
| TraesCS1D01G039200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 54.27 | 51.03 |
| TraesCS2D01G508200.1 | Wheat | plasma membrane, plastid | 50.55 | 50.44 |
| PGSC0003DMT400037757 | Potato | plastid | 50.77 | 50.33 |
| KRH35956 | Soybean | plasma membrane | 54.49 | 50.2 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 54.27 | 50.0 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 45.95 | 50.0 |
| TraesCS5D01G089800.1 | Wheat | golgi | 53.17 | 49.69 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 52.95 | 49.69 |
| TraesCS7D01G208700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 50.11 | 49.57 |
| TraesCS7D01G208800.1 | Wheat | endoplasmic reticulum | 52.52 | 49.48 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 53.61 | 49.4 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 52.95 | 49.19 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 41.79 | 49.1 |
| TraesCS7D01G102800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 48.14 | 49.0 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 53.17 | 48.99 |
| TraesCS7D01G102900.1 | Wheat | golgi, plasma membrane, plastid | 51.42 | 48.96 |
| TraesCS2D01G508300.1 | Wheat | endoplasmic reticulum, plasma membrane | 49.23 | 48.81 |
| Bra004034.1-P | Field mustard | plasma membrane | 52.52 | 48.78 |
| CDY07381 | Canola | plasma membrane | 52.74 | 48.49 |
| CDY04232 | Canola | plasma membrane | 52.74 | 48.49 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 52.3 | 48.38 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 52.3 | 48.38 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 52.3 | 48.19 |
| TraesCS7D01G102400.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 50.55 | 48.12 |
| CDY42109 | Canola | plasma membrane | 52.3 | 48.09 |
| Bra024749.1-P | Field mustard | plasma membrane | 52.3 | 48.09 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 52.08 | 47.98 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 51.86 | 47.78 |
| AT1G68530.1 | Thale cress | plasma membrane | 51.86 | 47.69 |
| TraesCS7D01G102000.1 | Wheat | mitochondrion, plastid | 51.64 | 47.48 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 51.42 | 47.38 |
| Solyc02g063140.2.1 | Tomato | golgi | 51.42 | 47.38 |
| AT1G25450.1 | Thale cress | plasma membrane | 50.98 | 47.36 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 49.67 | 46.14 |
| TraesCS5D01G017000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 46.61 | 45.13 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 49.89 | 44.53 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 50.55 | 44.51 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 50.55 | 44.0 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 49.45 | 43.55 |
| TraesCS4D01G277300.1 | Wheat | golgi | 47.48 | 42.63 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 48.58 | 42.61 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 48.14 | 41.98 |
| TraesCS1D01G374700.1 | Wheat | plasma membrane | 46.39 | 41.81 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 49.02 | 41.1 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 45.3 | 38.4 |
| TraesCS4D01G296400.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.2 | 37.41 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 6.56 | 13.57 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF64 | SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS7D01G029500 | EnsemblPlants:TraesCS7D01G029500.1 | TIGR:cd00831 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:14820120..14821493
Molecular Weight (calculated)
49791.3 Da
IEP (calculated)
7.703
GRAVY (calculated)
0.168
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MALIPHPRHF VAIVDIVLGC LRACEPIHLV LAGLLAAGLA TVQLMKRRRT VYLVDYACFQ GIGSCRMPRA TFIEHIHLNP LFDEHSVSFM TRMLESSAIG
101: EETRLPAGDL YMPAQNSFQE ARAEAELVVF SAIDDLFAKT VVTADAIDIL VVNCSVFAPV PSISDMIVNR YKLRDDVRAV NLSGMGCSAG VISAGLAAGL
201: LQATGHGATQ HALVVSTEII TCNFYTGKER PMQLSNVLFR VGGAAVLLST SEDRARFRLS HLVRTSTTGT HDGSYSCVFQ EEDGEGNLGV NLSKDLLAVA
301: GNALKANIRA VAPLVLPLSE QLLFAMSFVA RKLGLTVKPH VPGFRKAFDH FCVHCGGRAV IDKVQSSLGL SDEQVEASRM TLHRFGNTSS STVWYELAYI
401: EAKGRMRKND TVWMIAFGSG FKCNSAVWEC IRPADQPDRA WAGCIHRYPA TNYHSSI
101: EETRLPAGDL YMPAQNSFQE ARAEAELVVF SAIDDLFAKT VVTADAIDIL VVNCSVFAPV PSISDMIVNR YKLRDDVRAV NLSGMGCSAG VISAGLAAGL
201: LQATGHGATQ HALVVSTEII TCNFYTGKER PMQLSNVLFR VGGAAVLLST SEDRARFRLS HLVRTSTTGT HDGSYSCVFQ EEDGEGNLGV NLSKDLLAVA
301: GNALKANIRA VAPLVLPLSE QLLFAMSFVA RKLGLTVKPH VPGFRKAFDH FCVHCGGRAV IDKVQSSLGL SDEQVEASRM TLHRFGNTSS STVWYELAYI
401: EAKGRMRKND TVWMIAFGSG FKCNSAVWEC IRPADQPDRA WAGCIHRYPA TNYHSSI
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.