Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G507700.1 | Wheat | golgi, plasma membrane | 95.41 | 95.41 |
| HORVU2Hr1G112840.1 | Barley | endoplasmic reticulum, golgi | 88.21 | 86.32 |
| TraesCS7D01G102300.1 | Wheat | mitochondrion | 48.69 | 76.9 |
| TraesCS2D01G508000.1 | Wheat | mitochondrion | 51.75 | 74.53 |
| TraesCS7D01G102800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 70.52 | 71.94 |
| TraesCS7D01G102000.1 | Wheat | mitochondrion, plastid | 75.33 | 69.42 |
| TraesCS7D01G209400.1 | Wheat | cytosol | 56.33 | 68.98 |
| TraesCS2D01G508300.1 | Wheat | endoplasmic reticulum, plasma membrane | 69.43 | 68.98 |
| TraesCS7D01G102900.1 | Wheat | golgi, plasma membrane, plastid | 70.31 | 67.08 |
| TraesCS7D01G102400.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 68.78 | 65.62 |
| TraesCS5D01G089800.1 | Wheat | golgi | 64.85 | 60.74 |
| TraesCS7D01G208600.1 | Wheat | cytosol | 46.07 | 55.24 |
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 49.56 | 53.04 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 53.49 | 52.8 |
| TraesCS4D01G273400.1 | Wheat | endoplasmic reticulum | 55.24 | 52.38 |
| TraesCS7D01G519300.1 | Wheat | golgi, plasma membrane | 53.71 | 51.46 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 54.15 | 51.24 |
| TraesCS7D01G035700.1 | Wheat | plasma membrane | 53.71 | 50.72 |
| TraesCS7D01G029500.1 | Wheat | plasma membrane | 50.44 | 50.55 |
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 52.84 | 50.52 |
| TraesCS7D01G089200.1 | Wheat | endoplasmic reticulum, plasma membrane | 51.97 | 50.32 |
| TraesCS7D01G208500.1 | Wheat | golgi | 53.49 | 49.6 |
| TraesCS3D01G444000.1 | Wheat | golgi | 52.84 | 49.49 |
| TraesCS1D01G042300.1 | Wheat | golgi | 50.66 | 48.54 |
| TraesCS4D01G008200.1 | Wheat | plasma membrane | 51.97 | 48.37 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 50.22 | 47.23 |
| TraesCS7D01G208800.1 | Wheat | endoplasmic reticulum | 50.0 | 47.22 |
| TraesCS1D01G039200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 49.56 | 46.71 |
| PGSC0003DMT400037757 | Potato | plastid | 46.51 | 46.2 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 48.47 | 45.12 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 37.99 | 44.73 |
| TraesCS7D01G208700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 44.98 | 44.59 |
| KRH35956 | Soybean | plasma membrane | 48.25 | 44.56 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 48.03 | 44.35 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 47.6 | 44.13 |
| TraesCS6D01G321600.1 | Wheat | golgi | 48.25 | 43.94 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 47.38 | 43.93 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 40.17 | 43.81 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 47.38 | 43.75 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 47.16 | 43.55 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 46.94 | 43.35 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 46.51 | 43.29 |
| Bra004034.1-P | Field mustard | plasma membrane | 46.51 | 43.29 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 46.51 | 42.94 |
| CDY04232 | Canola | plasma membrane | 46.51 | 42.86 |
| CDY07381 | Canola | plasma membrane | 46.51 | 42.86 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 46.29 | 42.74 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 46.29 | 42.74 |
| Bra024749.1-P | Field mustard | plasma membrane | 46.29 | 42.66 |
| CDY42109 | Canola | plasma membrane | 46.29 | 42.66 |
| Solyc02g063140.2.1 | Tomato | golgi | 45.85 | 42.34 |
| AT1G68530.1 | Thale cress | plasma membrane | 45.63 | 42.05 |
| AT1G25450.1 | Thale cress | plasma membrane | 44.98 | 41.87 |
| TraesCS5D01G017000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 42.58 | 41.31 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 46.72 | 41.23 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 45.85 | 41.02 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 44.76 | 39.5 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 44.76 | 39.35 |
| TraesCS1D01G374700.1 | Wheat | plasma membrane | 43.45 | 39.25 |
| TraesCS4D01G277300.1 | Wheat | golgi | 43.45 | 39.1 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 44.1 | 38.48 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 45.63 | 38.35 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 43.45 | 37.98 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 43.45 | 36.92 |
| TraesCS4D01G296400.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.65 | 32.78 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 5.9 | 12.22 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF18 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS2D01G508200 | EnsemblPlants:TraesCS2D01G508200.1 |
| TIGR:cd00831 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:601262563..601263939
Molecular Weight (calculated)
50571.7 Da
IEP (calculated)
8.813
GRAVY (calculated)
0.152
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MILATAVLTE VTQWLSTARK TMPQSSDICL IHLLPIALLI VTATIYHALR PRNVYLVDYS CFRPSSNFRY PKATSVEHAR LSPLIDDSTA NFIASIHERS
101: GMGDQTYFPP VVMHMEPYCG LDEARTEAEL VVFSVIDDLL AKTCINLDAV GVLITNCSLF CPVPSIADMI VNRYKLRGDL RVMNLSGMAC SASVTAVGLA
201: SNILRFMPWG SYALVVSTEI VGPCYYVGNK RSMQLTNLLF RMGGVAKLLS TSRSKARFRL GHFTRTITAA SNTAYRCVYQ EEDEKGNLGI ALSKDLMAVA
301: GDALTANITS TAPLVLPASE LSKFWLFCMA KKVLHWRKIR PYIPNFSVAF HHFCIHVGGP AVITSVQHGL GLSDKHVEPS RMTLHRFGNQ STSSVWYELA
401: YIEAKGRMKK GNKVWMIGFG AGYECNTVGW MCIQPSSGAD GPWASCIHRY PVDVSNKV
101: GMGDQTYFPP VVMHMEPYCG LDEARTEAEL VVFSVIDDLL AKTCINLDAV GVLITNCSLF CPVPSIADMI VNRYKLRGDL RVMNLSGMAC SASVTAVGLA
201: SNILRFMPWG SYALVVSTEI VGPCYYVGNK RSMQLTNLLF RMGGVAKLLS TSRSKARFRL GHFTRTITAA SNTAYRCVYQ EEDEKGNLGI ALSKDLMAVA
301: GDALTANITS TAPLVLPASE LSKFWLFCMA KKVLHWRKIR PYIPNFSVAF HHFCIHVGGP AVITSVQHGL GLSDKHVEPS RMTLHRFGNQ STSSVWYELA
401: YIEAKGRMKK GNKVWMIGFG AGYECNTVGW MCIQPSSGAD GPWASCIHRY PVDVSNKV
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.