Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 98.48 | 98.48 |
| TraesCS1A01G406200.1 | Wheat | plasma membrane | 97.14 | 97.7 |
| Os05t0568000-02 | Rice | plasma membrane | 90.1 | 92.02 |
| EES19964 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 90.67 | 91.54 |
| Zm00001d039053_P001 | Maize | plasma membrane | 88.38 | 90.27 |
| Zm00001d009608_P001 | Maize | plasma membrane | 86.29 | 89.7 |
| HORVU1Hr1G089710.3 | Barley | plastid | 97.52 | 86.93 |
| CDX89699 | Canola | cytosol | 49.71 | 80.31 |
| GSMUA_Achr6P27270_001 | Banana | cytosol, peroxisome, plasma membrane | 64.0 | 79.62 |
| GSMUA_Achr2P08980_001 | Banana | golgi, peroxisome, plasma membrane | 68.57 | 77.92 |
| Bra025738.1-P | Field mustard | plasma membrane | 74.48 | 77.27 |
| CDY29431 | Canola | plasma membrane | 71.24 | 77.27 |
| Solyc04g080450.1.1 | Tomato | golgi, peroxisome, plasma membrane | 75.81 | 76.98 |
| PGSC0003DMT400009451 | Potato | cytosol, peroxisome, plasma membrane | 75.81 | 76.69 |
| Bra031081.1-P | Field mustard | plasma membrane | 74.48 | 76.52 |
| CDY21665 | Canola | plasma membrane | 74.29 | 76.47 |
| CDX81929 | Canola | plasma membrane | 74.29 | 76.47 |
| CDY26665 | Canola | cytosol, peroxisome, plasma membrane | 72.0 | 76.36 |
| Bra037304.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 66.29 | 76.32 |
| AT1G19440.1 | Thale cress | golgi, peroxisome, plasma membrane | 74.86 | 76.16 |
| KRH15203 | Soybean | plasma membrane | 73.9 | 76.08 |
| CDY47457 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 56.19 | 75.84 |
| VIT_18s0001g12550.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 73.52 | 75.83 |
| KRH05829 | Soybean | cytosol, peroxisome, plasma membrane | 74.1 | 75.83 |
| KRH51526 | Soybean | plasma membrane | 63.43 | 75.17 |
| GSMUA_Achr9P06980_001 | Banana | cytosol, golgi, peroxisome | 67.24 | 74.95 |
| CDX71278 | Canola | cytosol, peroxisome, plasma membrane | 71.81 | 74.36 |
| CDY46211 | Canola | cytosol, peroxisome, plasma membrane | 71.81 | 74.36 |
| AT2G16280.1 | Thale cress | golgi, peroxisome, plasma membrane | 72.38 | 74.22 |
| Bra001974.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 71.62 | 74.16 |
| CDY47458 | Canola | cytosol | 6.86 | 72.0 |
| GSMUA_Achr5P09090_001 | Banana | golgi, peroxisome, plasma membrane | 55.81 | 69.93 |
| CDY10355 | Canola | cytosol | 33.9 | 68.99 |
| CDX76286 | Canola | golgi | 62.29 | 68.99 |
| CDY46243 | Canola | golgi | 62.1 | 68.78 |
| AT4G34510.1 | Thale cress | plasma membrane | 63.62 | 68.58 |
| Bra034634.1-P | Field mustard | golgi | 61.52 | 68.14 |
| CDY26762 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 61.14 | 68.01 |
| TraesCS7D01G350500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 64.95 | 65.45 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 61.33 | 64.92 |
| TraesCS6D01G166600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 64.76 | 64.89 |
| TraesCS1D01G420900.1 | Wheat | peroxisome | 64.0 | 64.74 |
| Bra036405.1-P | Field mustard | cytosol, plasma membrane, plastid | 54.1 | 61.61 |
| CDX75415 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 53.9 | 60.99 |
| CDX69040 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 53.9 | 60.99 |
| AT2G15090.1 | Thale cress | golgi | 55.62 | 60.71 |
| CDX89700 | Canola | endoplasmic reticulum, golgi, plasma membrane | 49.71 | 60.56 |
| CDX71202 | Canola | endoplasmic reticulum, golgi, plasma membrane | 54.86 | 60.38 |
| CDY17465 | Canola | plasma membrane | 54.48 | 60.21 |
| Bra017641.1-P | Field mustard | golgi | 55.05 | 59.96 |
| CDY02266 | Canola | endoplasmic reticulum, golgi, plasma membrane | 50.67 | 59.78 |
| CDX72475 | Canola | endoplasmic reticulum, golgi | 48.0 | 59.57 |
| AT4G34250.1 | Thale cress | endoplasmic reticulum, golgi | 55.62 | 59.23 |
| Bra013081.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 54.67 | 58.93 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 57.33 | 58.79 |
| AT4G34520.1 | Thale cress | golgi | 56.57 | 58.7 |
| Bra034635.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 56.57 | 58.7 |
| CDY49290 | Canola | endoplasmic reticulum, golgi | 47.05 | 58.39 |
| CDX76287 | Canola | endoplasmic reticulum, golgi, plasma membrane | 56.19 | 58.3 |
| TraesCS4D01G296400.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.14 | 55.56 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 57.52 | 55.41 |
| TraesCS4D01G226100.1 | Wheat | peroxisome | 55.24 | 53.8 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 47.24 | 53.45 |
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 43.05 | 52.8 |
| TraesCS4D01G277300.1 | Wheat | golgi | 50.86 | 52.46 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 47.24 | 51.24 |
| TraesCS7D01G519300.1 | Wheat | golgi, plasma membrane | 46.29 | 50.84 |
| TraesCS7D01G208600.1 | Wheat | cytosol | 36.95 | 50.79 |
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 46.29 | 50.73 |
| TraesCS7D01G102300.1 | Wheat | mitochondrion | 28.0 | 50.69 |
| TraesCS7D01G029500.1 | Wheat | plasma membrane | 44.0 | 50.55 |
| TraesCS2D01G508000.1 | Wheat | mitochondrion | 30.48 | 50.31 |
| TraesCS4D01G273400.1 | Wheat | endoplasmic reticulum | 46.1 | 50.1 |
| TraesCS7D01G209400.1 | Wheat | cytosol | 35.62 | 50.0 |
| TraesCS7D01G035700.1 | Wheat | plasma membrane | 45.9 | 49.69 |
| TraesCS7D01G208500.1 | Wheat | golgi | 46.67 | 49.6 |
| TraesCS7D01G089200.1 | Wheat | endoplasmic reticulum, plasma membrane | 44.19 | 49.05 |
| TraesCS1D01G374700.1 | Wheat | plasma membrane | 47.24 | 48.92 |
| TraesCS3D01G444000.1 | Wheat | golgi | 45.33 | 48.67 |
| TraesCS6D01G321600.1 | Wheat | golgi | 45.52 | 47.51 |
| TraesCS5D01G089800.1 | Wheat | golgi | 43.05 | 46.22 |
| TraesCS1D01G042300.1 | Wheat | golgi | 41.14 | 45.19 |
| TraesCS7D01G102800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 38.29 | 44.77 |
| TraesCS1D01G039200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 41.33 | 44.65 |
| TraesCS2D01G508200.1 | Wheat | plasma membrane, plastid | 38.48 | 44.1 |
| TraesCS2D01G508300.1 | Wheat | endoplasmic reticulum, plasma membrane | 38.67 | 44.03 |
| TraesCS7D01G208800.1 | Wheat | endoplasmic reticulum | 40.57 | 43.92 |
| TraesCS7D01G102900.1 | Wheat | golgi, plasma membrane, plastid | 39.81 | 43.54 |
| TraesCS7D01G208700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 38.29 | 43.51 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 40.19 | 43.33 |
| TraesCS4D01G008200.1 | Wheat | plasma membrane | 40.19 | 42.89 |
| TraesCS7D01G102000.1 | Wheat | mitochondrion, plastid | 40.0 | 42.25 |
| TraesCS7D01G102400.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 38.1 | 41.67 |
| TraesCS5D01G017000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 34.48 | 38.35 |
| TraesCS1D01G420600.2 | Wheat | cytosol | 8.19 | 19.46 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF65 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS1D01G414600 | EnsemblPlants:TraesCS1D01G414600.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:474375066..474376643
Molecular Weight (calculated)
58213.6 Da
IEP (calculated)
9.036
GRAVY (calculated)
-0.027
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGGIAPPPA AAATEAETAA TTPSHRRLPD FLQSVNLKYV KLGYHYLITH LITLLLLPLM AVIVLEAGRT DPDDLRQLWL HLQYNLVSVL VLSAVLVFGA
101: TVYVLTRPRP VYLVDFACYK APDHLKVGFQ EFLRHSALCG FSNDALEFQR KILERSGLSE ETYCPEGMHA IPPEPTMANA RAEAESVMFG ALDSLFAATG
201: VKPKDVGILV VNCSLFNPTP SLSAMIVNRY KLRGNVRSFN LGGMGCSAGV IAIDLARDML QVHRGTYAVV VSTENITQNW YFGNRKSMLI PNCLFRVGCS
301: AVLLSNRGAD RRRAKYSLKH VVRTHKGADD KAFNCVYQEQ DGEGKTGVSL SKDLMAIAGG ALKTNITTLG PLVLPFSEQL LFFATLVSKK LFNAKVKPYI
401: PDFKLAFEHF CIHAGGRAVI DELEKNLQLQ PVHVEASRMT LHRFGNTSSS SIWYELAYME AKGRVRRGDR IWQIAFGSGF KCNSAVWHAL RNVKPSPSTP
501: WDDCIDRYPV ELVDGFPTHN HKQQQ
101: TVYVLTRPRP VYLVDFACYK APDHLKVGFQ EFLRHSALCG FSNDALEFQR KILERSGLSE ETYCPEGMHA IPPEPTMANA RAEAESVMFG ALDSLFAATG
201: VKPKDVGILV VNCSLFNPTP SLSAMIVNRY KLRGNVRSFN LGGMGCSAGV IAIDLARDML QVHRGTYAVV VSTENITQNW YFGNRKSMLI PNCLFRVGCS
301: AVLLSNRGAD RRRAKYSLKH VVRTHKGADD KAFNCVYQEQ DGEGKTGVSL SKDLMAIAGG ALKTNITTLG PLVLPFSEQL LFFATLVSKK LFNAKVKPYI
401: PDFKLAFEHF CIHAGGRAVI DELEKNLQLQ PVHVEASRMT LHRFGNTSSS SIWYELAYME AKGRVRRGDR IWQIAFGSGF KCNSAVWHAL RNVKPSPSTP
501: WDDCIDRYPV ELVDGFPTHN HKQQQ
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.