Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46243 | Canola | golgi | 81.52 | 83.76 |
| CDX76286 | Canola | golgi | 80.9 | 83.12 |
| Bra034634.1-P | Field mustard | golgi | 80.7 | 82.91 |
| AT2G16280.1 | Thale cress | golgi, peroxisome, plasma membrane | 81.31 | 77.34 |
| KRH51526 | Soybean | plasma membrane | 68.58 | 75.39 |
| VIT_03s0063g02640.t01 | Wine grape | plasma membrane | 73.92 | 71.43 |
| AT1G19440.1 | Thale cress | golgi, peroxisome, plasma membrane | 71.87 | 67.83 |
| GSMUA_Achr2P08980_001 | Banana | golgi, peroxisome, plasma membrane | 64.27 | 67.75 |
| Os05t0568000-02 | Rice | plasma membrane | 70.23 | 66.54 |
| EES19964 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 70.64 | 66.15 |
| Zm00001d039053_P001 | Maize | plasma membrane | 69.61 | 65.95 |
| Zm00001d009608_P001 | Maize | plasma membrane | 68.38 | 65.94 |
| GSMUA_Achr6P27270_001 | Banana | cytosol, peroxisome, plasma membrane | 55.85 | 64.45 |
| GSMUA_Achr9P06980_001 | Banana | cytosol, golgi, peroxisome | 62.01 | 64.12 |
| TraesCS1A01G406200.1 | Wheat | plasma membrane | 68.38 | 63.79 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 68.58 | 63.62 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 68.58 | 63.62 |
| GSMUA_Achr5P09090_001 | Banana | golgi, peroxisome, plasma membrane | 53.39 | 62.05 |
| AT4G34520.1 | Thale cress | golgi | 63.45 | 61.07 |
| AT2G15090.1 | Thale cress | golgi | 58.73 | 59.46 |
| AT4G34250.1 | Thale cress | endoplasmic reticulum, golgi | 59.96 | 59.23 |
| AT2G26640.1 | Thale cress | plasma membrane | 60.57 | 57.96 |
| AT1G68530.1 | Thale cress | plasma membrane | 58.32 | 57.14 |
| HORVU1Hr1G089710.3 | Barley | plastid | 68.58 | 56.71 |
| AT1G04220.1 | Thale cress | plasma membrane | 61.4 | 56.63 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 61.19 | 56.33 |
| AT1G25450.1 | Thale cress | plasma membrane | 56.88 | 56.3 |
| AT1G01120.1 | Thale cress | plasma membrane | 54.83 | 50.57 |
| AT3G10280.1 | Thale cress | endoplasmic reticulum, plasma membrane | 47.64 | 50.54 |
| AT2G46720.1 | Thale cress | endoplasmic reticulum, plasma membrane | 48.25 | 50.43 |
| AT2G26250.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 55.24 | 48.91 |
| AT5G49070.1 | Thale cress | plasma membrane, vacuole | 42.71 | 44.83 |
| AT1G71160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 41.48 | 43.91 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | EntrezGene:829602 |
| UniProt:A0A178UZI2 | InterPro:ACP_syn_III_C | ProteinID:AEE86387.1 | ArrayExpress:AT4G34510 | EnsemblPlantsGene:AT4G34510 | RefSeq:AT4G34510 |
| TAIR:AT4G34510 | RefSeq:AT4G34510-TAIR-G | EnsemblPlants:AT4G34510.1 | TAIR:AT4G34510.1 | ProteinID:CAA18830.1 | ProteinID:CAB80168.1 |
| CHEMBL:CHEMBL2242738 | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | GO:GO:0102336 | GO:GO:0102337 |
| GO:GO:0102338 | GO:GO:0102756 | InterPro:IPR016039 | Symbol:KCS17 | RefSeq:NP_195177.1 | UniProt:O65677 |
| ProteinID:OAO99065.1 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PO:PO:0000013 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31561 | PANTHER:PTHR31561:SF23 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI0000048A61 |
Description
KCS173-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UZI2]
Coordinates
chr4:+:16491692..16493762
Molecular Weight (calculated)
54914.9 Da
IEP (calculated)
9.707
GRAVY (calculated)
-0.028
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MDANGGPVQI RTQNYVKLGY HYLITHFFKL MFLPLMAVLF MNVSLLSLNH LQLYYNSTGF IFVITLAIVG SIVFFMSRPR SIYLLDYSCY LPPSSQKVSY
101: QKFMNNSSLI QDFSETSLEF QRKILIRSGL GEETYLPDSI HSIPPRPTMA AAREEAEQVI FGALDNLFEN TKINPREIGV LVVNCSLFNP TPSLSAMIVN
201: KYKLRGNIKS FNLGGMGCSA GVIAVDLASD MLQIHRNTFA LVVSTENITQ NWYFGNKKAM LIPNCLFRVG GSAVLLSNKP LDRKRSKYKL VHTVRTHKGS
301: DENAFNCVYQ EQDECLKTGV SLSKDLMAIA GEALKTNITS LGPLVLPISE QILFFATFVA KRLFNDKKKK PYIPDFKLAL DHFCIHAGGR AVIDELEKSL
401: KLSPKHVEAS RMTLHRFGNT SSSSIWYELA YTEAKGRMRK GNRVWQIAFG SGFKCNSAVW VALRNVEPSV NNPWEHCIHR YPVKIDL
101: QKFMNNSSLI QDFSETSLEF QRKILIRSGL GEETYLPDSI HSIPPRPTMA AAREEAEQVI FGALDNLFEN TKINPREIGV LVVNCSLFNP TPSLSAMIVN
201: KYKLRGNIKS FNLGGMGCSA GVIAVDLASD MLQIHRNTFA LVVSTENITQ NWYFGNKKAM LIPNCLFRVG GSAVLLSNKP LDRKRSKYKL VHTVRTHKGS
301: DENAFNCVYQ EQDECLKTGV SLSKDLMAIA GEALKTNITS LGPLVLPISE QILFFATFVA KRLFNDKKKK PYIPDFKLAL DHFCIHAGGR AVIDELEKSL
401: KLSPKHVEAS RMTLHRFGNT SSSSIWYELA YTEAKGRMRK GNRVWQIAFG SGFKCNSAVW VALRNVEPSV NNPWEHCIHR YPVKIDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.