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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 92.61 91.54
Zm00001d039053_P001 Maize plasma membrane 91.05 91.05
Zm00001d009608_P001 Maize plasma membrane 88.52 90.1
TraesCS1D01G414600.1 Wheat peroxisome 92.02 90.1
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 91.83 89.9
TraesCS1A01G406200.1 Wheat plasma membrane 91.25 89.85
CDX89699 Canola cytosol 52.14 82.46
HORVU1Hr1G089710.3 Barley plastid 91.63 79.97
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 65.56 79.86
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 70.82 78.79
CDX81929 Canola plasma membrane 77.43 78.04
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 78.4 77.95
Bra031081.1-P Field mustard plasma membrane 77.43 77.89
CDY21665 Canola plasma membrane 77.04 77.65
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 68.87 77.63
VIT_18s0001g12550.t01 Wine grape cytosol, peroxisome, plasma membrane 76.85 77.6
CDY29431 Canola plasma membrane 72.96 77.48
Bra025738.1-P Field mustard plasma membrane 76.26 77.47
PGSC0003DMT400009451 Potato cytosol, peroxisome, plasma membrane 78.21 77.46
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 58.56 77.38
KRH51526 Soybean plasma membrane 66.34 76.98
AT1G19440.1 Thale cress golgi, peroxisome, plasma membrane 77.24 76.94
KRH05829 Soybean cytosol, peroxisome, plasma membrane 76.46 76.61
CDY26665 Canola cytosol, peroxisome, plasma membrane 73.54 76.36
KRH15203 Soybean plasma membrane 75.68 76.27
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 75.1 75.39
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 68.87 75.16
CDX71278 Canola cytosol, peroxisome, plasma membrane 74.12 75.15
CDY46211 Canola cytosol, peroxisome, plasma membrane 74.12 75.15
Bra001974.1-P Field mustard cytosol, peroxisome, plasma membrane 73.93 74.95
CDY10355 Canola cytosol 36.19 72.09
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 57.98 71.12
CDX76286 Canola golgi 64.98 70.46
CDY46243 Canola golgi 64.79 70.25
AT4G34510.1 Thale cress plasma membrane 66.54 70.23
CDY47458 Canola cytosol 6.81 70.0
Bra034634.1-P Field mustard golgi 64.2 69.62
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 63.03 68.64
Os06t0598800-01 Rice cytosol, endoplasmic reticulum, plasma membrane 67.12 66.47
Os05t0574600-01 Rice endoplasmic reticulum, peroxisome, plastid 67.12 66.35
Os03t0220100-01 Rice golgi, mitochondrion 62.65 65.18
Os02t0205500-01 Rice cytosol, peroxisome, plasma membrane 65.56 64.93
Os11t0591200-01 Rice mitochondrion 54.28 64.58
Bra036405.1-P Field mustard cytosol, plasma membrane, plastid 55.84 62.26
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 52.14 62.18
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.84 61.85
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 55.84 61.85
AT2G15090.1 Thale cress golgi 57.78 61.75
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 53.31 61.57
Bra017641.1-P Field mustard golgi 57.59 61.41
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 56.61 61.01
Bra013081.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 57.39 60.57
CDX72475 Canola endoplasmic reticulum, golgi 49.61 60.28
CDY17465 Canola plasma membrane 55.25 59.79
AT4G34250.1 Thale cress endoplasmic reticulum, golgi 57.2 59.63
AT4G34520.1 Thale cress golgi 58.37 59.29
CDY49290 Canola endoplasmic reticulum, golgi 48.64 59.1
Bra034635.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 57.78 58.7
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 57.39 58.3
Os03t0181500-01 Rice plasma membrane 59.14 56.09
Os03t0245700-02 Rice cytosol, peroxisome, plastid 56.61 54.7
Os06t0262800-01 Rice plasma membrane 49.22 51.21
Os02t0731900-01 Rice plasma membrane 49.81 51.1
Os10t0416200-01 Rice cytosol, mitochondrion 49.81 48.95
Os01t0529800-01 Rice plasma membrane 42.22 45.4
Os06t0260500-00 Rice mitochondrion 44.16 43.07
Os05t0574500-01 Rice nucleus 8.37 19.46
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10EntrezGene:4339645MapMan:5.1.6.1.1
ProteinID:AAU10670.1InterPro:ACP_syn_III_CEMBL:AK101103EMBL:AK119596ProteinID:BAF18268.1ProteinID:BAS95395.1
ProteinID:EEE64728.1InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629
GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039EnsemblPlantsGene:Os05g0568000
EnsemblPlants:Os05t0568000-02PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF65
UniProt:Q688V9SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI000042ABB3RefSeq:XP_015639811.1
SEG:seg:::::
Description
KCS1, OsKCS1Similar to FAE1. (Os05t0568000-02)
Coordinates
chr5:-:28278858..28281235
Molecular Weight (calculated)
57430.8 Da
IEP (calculated)
9.227
GRAVY (calculated)
-0.037
Length
514 amino acids
Sequence
(BLAST)
001: MNGGDAAAAA ATPSHRRLPD FLQSVNLKYV KLGYHYLITH LLTLLLLPLM AVIVLEAGRT DPDDLRQLWL HLQYNLVSVL VLSAVLVFGA TVYVLTRPRP
101: VYLVDFACYK PPDKLKVRFD EFLHHSKLCG FSDDCLEFQR KILERSGLSE ETYVPEAMHL IPPEPTMANA RAEAESVMFG ALDKLFKFTG VKPKDVGVLV
201: VNCSLFNPTP SLSAMIVNKY KLRGNIKSFN LGGMGCSAGV IAVDLARDML QVHRNTYAVV VSTENITQNW YFGNRKSMLI PNCLFRVGGA AVLLSNRGAD
301: RRRAKYALKH VVRTHKGADN KAFNCVYQEQ DDEGKTGVSL SKDLMAIAGG ALKTNITTLG PLVLPFSEQL LFFATLVAKK LFNAKIKPYI PDFKLAFEHF
401: CIHAGGRAVI DELEKNLQLQ PVHVEASRMT LHRFGNTSSS SIWYELAYME AKGRVRRGHR IWQIAFGSGF KCNSAVWHAL RNVNPSPESP WEDCIDRYPV
501: ELVDGFATHN NTQQ
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.