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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX72475 Canola endoplasmic reticulum, golgi 96.22 96.22
Bra017641.1-P Field mustard golgi 96.69 84.85
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 84.87 77.37
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 84.63 77.16
AT4G34250.1 Thale cress endoplasmic reticulum, golgi 81.56 69.98
CDY47458 Canola cytosol 8.04 68.0
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 71.87 63.73
CDY10355 Canola cytosol 37.83 62.02
CDX89699 Canola cytosol 43.97 57.23
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 57.92 55.06
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 56.03 54.99
KRH51526 Soybean plasma membrane 56.74 54.18
CDX76286 Canola golgi 59.34 52.95
CDY46243 Canola golgi 59.34 52.95
CDY17465 Canola plasma membrane 58.16 51.79
VIT_03s0063g02640.t01 Wine grape plasma membrane 61.7 51.79
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 56.26 51.52
CDX94721 Canola cytosol 48.23 51.52
CDX71278 Canola cytosol, peroxisome, plasma membrane 60.52 50.49
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 60.28 50.4
CDY15199 Canola cytosol 40.43 50.29
CDY46211 Canola cytosol, peroxisome, plasma membrane 60.05 50.1
CDY63070 Canola cytosol 43.5 50.0
Zm00001d009608_P001 Maize plasma membrane 59.57 49.9
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 45.86 49.87
CDY21665 Canola plasma membrane 59.57 49.41
CDX81929 Canola plasma membrane 59.57 49.41
CDY29431 Canola plasma membrane 56.26 49.17
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 48.94 49.05
Zm00001d039053_P001 Maize plasma membrane 59.57 49.03
CDY26665 Canola cytosol, peroxisome, plasma membrane 57.21 48.89
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 48.23 48.69
Os05t0568000-02 Rice plasma membrane 59.1 48.64
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 59.1 48.08
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 53.19 47.77
TraesCS1A01G406200.1 Wheat plasma membrane 58.39 47.32
TraesCS1D01G414600.1 Wheat peroxisome 58.39 47.05
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 58.39 47.05
CDX70186 Canola plastid 55.79 46.0
CDX98800 Canola plastid 55.79 45.56
CDY14892 Canola endoplasmic reticulum, golgi, plastid 56.26 45.25
CDX96912 Canola endoplasmic reticulum, golgi, plastid 56.03 44.97
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 48.94 43.86
CDX89834 Canola plasma membrane 53.43 43.38
CDY07381 Canola plasma membrane 50.59 43.06
CDY04232 Canola plasma membrane 50.59 43.06
CDY18212 Canola plasma membrane 52.96 42.34
HORVU1Hr1G089710.3 Barley plastid 58.39 41.94
CDY42109 Canola plasma membrane 49.17 41.85
CDX90012 Canola cytosol 50.83 40.64
CDY37475 Canola plasma membrane 44.92 39.75
CDY37951 Canola endoplasmic reticulum, plasma membrane 42.08 39.64
CDY32443 Canola plasma membrane 44.68 39.54
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 41.84 39.42
CDY49219 Canola endoplasmic reticulum, plasma membrane 41.61 38.85
CDX68323 Canola endoplasmic reticulum, golgi 40.9 38.36
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 44.44 35.34
CDY33931 Canola plastid 38.06 35.23
CDY05644 Canola plasma membrane, plastid, vacuole 38.06 35.23
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 45.39 35.04
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 45.15 34.92
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 44.68 34.43
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.12 33.28
CDY41551 Canola golgi 49.41 33.23
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078IEJ4UniProt:A0A078IEJ4InterPro:ACP_syn_III_CEnsemblPlants:CDY49290ProteinID:CDY49290ProteinID:CDY49290.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00092706001InterPro:IPR016039PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF23MetaCyc:PWY-4381MetaCyc:PWY-5080
MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602
MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-like
UniPathway:UPA00094UniParc:UPI0004EE7DAC::::
Description
BnaA03g51030D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A078IEJ4]
Coordinates
chrLK032822:+:119972..121420
Molecular Weight (calculated)
47580.7 Da
IEP (calculated)
8.993
GRAVY (calculated)
-0.091
Length
423 amino acids
Sequence
(BLAST)
001: MVFNYLTTHR LKLCFLPLLV AIAMQASRLS TQDLHSFYLS LQKNFTSLTI FSISLILGWT LYIMNRPKPV YLVDFSCYLP PSHLKASVKK IMHHVRVVRE
101: SGKWGKSDEN EYLMDFVTKI LERSGLGQET YVPEGLHCLP IEQSMVGSRK ETQEVILGAV DTLLRNTGIS PSEIGILVVN SSTFNPTPSA GVIAIDVAKS
201: LLQVHRNTYA LVVSTENITQ NLYVGNNKSM LVTNCLFRVG GAAVLLSNIS KDRKRVKYKL VHTVRVHTGS DDRSYGCATQ EEDEDGVVGV TLSKDLPMKF
301: FNPKIKHYMP NFKLAFEHFC IHAGGRALID ELEKNLHLSP LHVEASRMTL HRFGNTSSSS IWYELAYTEA KGRMKKGDRT WQIALGSGFK CNSCVWVALR
401: NVKASADNPW EECLNKYPVE IDI
Best Arabidopsis Sequence Match ( AT4G34250.1 )
(BLAST)
001: MDYPMKKVKI FFNYLMAHRF KLCFLPLMVA IAVEASRLST QDLQNFYLYL QNNHTSLTMF FLYLALGSTL YLMTRPKPVY LVDFSCYLPP SHLKASTQRI
101: MQHVRLVREA GAWKQESDYL MDFCEKILER SGLGQETYVP EGLQTLPLQQ NLAVSRIETE EVIIGAVDNL FRNTGISPSD IGILVVNSST FNPTPSLSSI
201: LVNKFKLRDN IKSLNLGGMG CSAGVIAIDA AKSLLQVHRN TYALVVSTEN ITQNLYMGNN KSMLVTNCLF RIGGAAILLS NRSIDRKRAK YELVHTVRVH
301: TGADDRSYEC ATQEEDEDGI VGVSLSKNLP MVAARTLKIN IATLGPLVLP ISEKFHFFVR FVKKKFLNPK LKHYIPDFKL AFEHFCIHAG GRALIDEMEK
401: NLHLTPLDVE ASRMTLHRFG NTSSSSIWYE LAYTEAKGRM TKGDRIWQIA LGSGFKCNSS VWVALRNVKP STNNPWEQCL HKYPVEIDID LKE
Arabidopsis Description
KCS163-ketoacyl-CoA synthase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYZ0]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.