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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 99.23 84.65
CDX89699 Canola cytosol 61.44 73.54
CDY46211 Canola cytosol, peroxisome, plasma membrane 92.8 71.2
CDX71278 Canola cytosol, peroxisome, plasma membrane 92.29 70.81
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 88.69 67.38
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 81.75 67.37
KRH51526 Soybean plasma membrane 74.04 65.01
CDY29431 Canola plasma membrane 78.15 62.81
VIT_03s0063g02640.t01 Wine grape plasma membrane 80.46 62.1
CDX76286 Canola golgi 75.58 62.03
CDY26665 Canola cytosol, peroxisome, plasma membrane 78.66 61.82
CDY46243 Canola golgi 75.06 61.6
CDY21665 Canola plasma membrane 78.41 59.8
CDX81929 Canola plasma membrane 78.15 59.61
Os05t0568000-02 Rice plasma membrane 77.38 58.56
Zm00001d039053_P001 Maize plasma membrane 76.86 58.17
Zm00001d009608_P001 Maize plasma membrane 75.06 57.82
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 77.12 57.69
CDX94721 Canola cytosol 58.35 57.32
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 75.84 56.19
TraesCS1D01G414600.1 Wheat peroxisome 75.84 56.19
TraesCS1A01G406200.1 Wheat plasma membrane 75.32 56.13
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 66.32 55.84
CDY15199 Canola cytosol 46.27 52.94
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 56.56 52.13
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 62.98 52.02
CDY10355 Canola cytosol 34.45 51.94
CDY63070 Canola cytosol 49.1 51.9
CDY17465 Canola plasma membrane 63.24 51.79
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 60.15 50.43
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 60.15 50.43
CDX70186 Canola plastid 66.32 50.29
HORVU1Hr1G089710.3 Barley plastid 76.09 50.25
CDX98800 Canola plastid 66.58 50.0
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 53.47 49.64
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 56.56 49.44
CDY07381 Canola plasma membrane 62.21 48.69
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 62.98 48.42
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 53.47 48.26
CDY04232 Canola plasma membrane 61.44 48.09
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 58.61 47.8
CDX89834 Canola plasma membrane 63.75 47.6
CDY14892 Canola endoplasmic reticulum, golgi, plastid 64.01 47.34
CDX96912 Canola endoplasmic reticulum, golgi, plastid 63.75 47.06
CDY42109 Canola plasma membrane 59.9 46.88
CDY18212 Canola plasma membrane 63.75 46.88
CDX72475 Canola endoplasmic reticulum, golgi 50.9 46.81
CDY49290 Canola endoplasmic reticulum, golgi 49.87 45.86
CDX90012 Canola cytosol 56.04 41.21
CDY37475 Canola plasma membrane 49.36 40.17
CDY32443 Canola plasma membrane 49.36 40.17
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 52.19 38.16
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 53.21 37.77
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 52.96 37.66
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 52.7 37.34
CDY49219 Canola endoplasmic reticulum, plasma membrane 42.93 36.87
CDY37951 Canola endoplasmic reticulum, plasma membrane 41.9 36.3
CDX68323 Canola endoplasmic reticulum, golgi 41.65 35.92
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 41.39 35.86
CDY33931 Canola plastid 41.13 35.01
CDY05644 Canola plasma membrane, plastid, vacuole 41.13 35.01
CDY41551 Canola golgi 50.39 31.16
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.9 31.08
CDY49218 Canola plasma membrane 0.0 0.0
CDY47458 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1GO:A0A078IBC8
UniProt:A0A078IBC8EnsemblPlants:CDY47457ProteinID:CDY47457ProteinID:CDY47457.1InterPro:Chalcone/stilbene_synth_CInterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00087508001InterPro:IPR016039PFAM:PF02797PFAM:PF08392PANTHER:PTHR31561
PANTHER:PTHR31561:SF65MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036
MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901
TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EE15DE::
Description
BnaA09g08660DBnaA09g08660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBC8]
Coordinates
chrLK032718:+:660..1829
Molecular Weight (calculated)
43583.2 Da
IEP (calculated)
8.745
GRAVY (calculated)
0.002
Length
389 amino acids
Sequence
(BLAST)
001: MAVVISEISR LTPDDFHQLW LHLQYNLVSF ILLSALAVVG CTVFVMTRSR SVYLVDYSCY LPPESLQVPY KKFMDHSKLI EDFNDSSLEF QRKILERSGL
101: GEETYLPEGL HCVPPRTTMV AAREEAEQVM FGCLDKLFQN TKVNPRDISV LVVNCSLFNP TPSLSAMIVN KYKLRGNVKS FNLGGMGCSA GVISIDLAKD
201: MLQVHRKTYA VVVSTENITQ NWYFGNKKAM LIPNCLFRVG GTAVLLSNKA SDRRRSKYMM VQTVRTHKGA NDKAFNCVYQ EQDDNGKTGV SLSKDLMAIA
301: GEALKANITT LGPLVLPISE QILFFATLVA KKLFNAKMKP YIPDFKLAFD HFCIHAGGRA VIDELEKNLE LSVTHVEASR MTLHRFGNT
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.