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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 7
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 96.03 94.82
AT3G10280.1 Thale cress endoplasmic reticulum, plasma membrane 64.39 88.24
AT2G46720.1 Thale cress endoplasmic reticulum, plasma membrane 65.02 87.77
CDY15199 Canola cytosol 37.36 69.12
CDX94721 Canola cytosol 38.47 61.11
CDY10355 Canola cytosol 24.64 60.08
CDY63070 Canola cytosol 35.14 60.05
CDX89699 Canola cytosol 31.0 60.0
CDY32443 Canola plasma membrane 41.18 54.18
CDY47458 Canola cytosol 4.29 54.0
CDY37475 Canola plasma membrane 41.02 53.97
VIT_15s0048g02720.t01 Wine grape cytosol, peroxisome, plasma membrane 44.52 52.83
CDX90012 Canola cytosol 44.36 52.74
CDX70186 Canola plastid 42.77 52.44
Solyc10g009240.2.1 Tomato peroxisome 44.04 52.36
CDX98800 Canola plastid 42.61 51.74
PGSC0003DMT400028047 Potato plasma membrane 43.4 51.03
CDX89834 Canola plasma membrane 42.13 50.86
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 37.52 50.86
CDY14892 Canola endoplasmic reticulum, golgi, plastid 42.45 50.76
CDX96912 Canola endoplasmic reticulum, golgi, plastid 42.45 50.66
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 31.16 50.39
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.04 50.22
CDX81929 Canola plasma membrane 40.7 50.2
CDY21665 Canola plasma membrane 40.7 50.2
KRH68953 Soybean cytosol, golgi, nucleus 42.29 50.19
CDY18212 Canola plasma membrane 42.13 50.09
CDY46243 Canola golgi 37.68 50.0
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 37.84 49.9
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 34.18 49.88
CDX76286 Canola golgi 37.52 49.79
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 34.98 49.44
CDX72475 Canola endoplasmic reticulum, golgi 33.23 49.41
CDY49290 Canola endoplasmic reticulum, golgi 33.23 49.41
CDY29431 Canola plasma membrane 37.68 48.97
GSMUA_Achr1P02540_001 Banana cytosol 32.91 48.82
CDY07381 Canola plasma membrane 38.47 48.69
CDY04232 Canola plasma membrane 38.47 48.69
EER91722 Sorghum peroxisome 41.34 48.6
CDY42109 Canola plasma membrane 38.31 48.49
CDY17465 Canola plasma membrane 36.57 48.42
Zm00001d030343_P001 Maize cytosol, peroxisome, plasma membrane 41.18 48.41
CDY26665 Canola cytosol, peroxisome, plasma membrane 38.0 48.28
Os03t0245700-02 Rice cytosol, peroxisome, plastid 40.54 47.93
TraesCS4D01G226100.1 Wheat peroxisome 41.02 47.87
TraesCS4A01G068400.1 Wheat peroxisome 40.86 47.5
TraesCS4B01G225500.1 Wheat peroxisome 41.18 47.44
HORVU4Hr1G063420.1 Barley peroxisome 41.02 47.34
CDY46211 Canola cytosol, peroxisome, plasma membrane 38.16 47.34
CDX71278 Canola cytosol, peroxisome, plasma membrane 38.0 47.14
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 37.52 46.64
Zm00001d028406_P001 Maize peroxisome 39.59 45.52
KXG39781 Sorghum peroxisome 39.43 45.17
Zm00001d047931_P001 Maize peroxisome 39.11 45.05
CDY33931 Canola plastid 31.8 43.76
CDY05644 Canola plasma membrane, plastid, vacuole 31.8 43.76
CDY37951 Canola endoplasmic reticulum, plasma membrane 31.0 43.43
CDX68323 Canola endoplasmic reticulum, golgi 31.0 43.24
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 30.68 42.98
CDY49219 Canola endoplasmic reticulum, plasma membrane 30.84 42.83
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 31.8 42.37
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 34.98 41.35
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 35.61 40.88
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 35.29 40.59
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 34.66 39.71
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078HV29UniProt:A0A078HV29InterPro:ACP_syn_III_CEnsemblPlants:CDY41551ProteinID:CDY41551ProteinID:CDY41551.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740
GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00073183001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PANTHER:PTHR31561
PANTHER:PTHR31561:SF65MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901InterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EEA4F9SEG:seg:
Description
BnaC04g00710DBnaC04g00710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV29]
Coordinates
chrLK032500:+:149091..151237
Molecular Weight (calculated)
70262.8 Da
IEP (calculated)
9.738
GRAVY (calculated)
-0.183
Length
629 amino acids
Sequence
(BLAST)
001: MANFKFPLLI IFVLSFSQLH LLQFHHDFFS SFPVKIGLLI ISILLYAYSS TRSKPVYLVD FSCHQPTDSC KISSETFFNM AKGAQLYTEE TIQFMTRILN
101: RSGLGDDTYA PRCMLTSPPT PSMFEARHEA ELVIFGALNS LFKKTGVEPR DIGIFIVNCS LFNPNPSLSS MIVNRYKLKT DVKTYNLSGM GCSAGAISVD
201: LAAHLLKANP NTYAVIVSTE NMTLSMYRGN DRSMLVPNCI FRVGGAAVLL SNRSQDRVRS KYELTQLVRT HKGASDKHYT CADQKEDDKG IVGVSLSREL
301: TIVAGDTLKT NLTALGPLVL PLSEKLRFII SIVKSRLFRL KSSPYVPNFK LCFEHFCIHA GGRALLDAVE KGLGLSEVDL EPSRMTLHRF GNTSSSSLWY
401: ELAYIEAKCR VKRGDRVWQL AFGSGFKCNS IVWRALRTIS ASETLVGNPW GDSIHKYPTL HHHIKDGEAM WTVKPVPMPV QFFRGITAST SVGYSQPPPS
501: NYNRIHLRLC NVPTKSQTSE SVGGLCQQIV LRSADSNPSK PIPKEREITG SDVLWAIQRA TAQRNRSKAD RMKKKKMRSV ELSSSSASKS TGDNGVDYFN
601: VKALTIKNDW GQRLDEFDKL LKDLQDTEL
Best Arabidopsis Sequence Match ( AT2G46720.1 )
(BLAST)
001: MFIAMADFKI LLLILILISL FELDLLHFHH DFFSPFPVKI GLLLISIFFY AYSTTRSKPV YLVDFSCHQP TDSCKISSET FFNMAKGAQL YTDETIQFMT
101: RILNRSGLGD DTYSPRCMLT SPPTPSMYEA RHESELVIFG ALNSLFKKTG IEPREVGIFI VNCSLFNPNP SLSSMIVNRY KLKTDVKTYN LSGMGCSAGA
201: ISVDLATNLL KANPNTYAVI VSTENMTLSM YRGNDRSMLV PNCLFRVGGA AVMLSNRSQD RVRSKYELTH IVRTHKGSSD KHYTCAEQKE DSKGIVGVAL
301: SKELTVVAGD SLKTNLTALG PLVLPLSEKL RFILFLVKSK LFRLKVSPYV PDFKLCFKHF CIHAGGRALL DAVEKGLGLS EFDLEPSRMT LHRFGNTSSS
401: SLWYELAYVE AKCRVKRGDR VWQLAFGSGF KCNSIVWRAL RTIPANESLV GNPWGDSVHK YPVHVT
Arabidopsis Description
HIC3-ketoacyl-CoA synthase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.