Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47458 Canola cytosol 15.89 82.0
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 97.67 58.47
CDX89699 Canola cytosol 73.26 58.15
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 100.0 57.98
Bra013081.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 100.0 52.98
CDY15199 Canola cytosol 59.69 45.29
CDY63070 Canola cytosol 62.79 44.02
KRH51526 Soybean plasma membrane 73.64 42.89
CDX94721 Canola cytosol 65.12 42.42
CDY17465 Canola plasma membrane 77.91 42.32
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 82.56 42.09
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 75.19 41.81
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 74.81 41.59
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 74.81 40.46
CDX76286 Canola golgi 74.03 40.3
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 65.12 40.1
CDY46243 Canola golgi 73.64 40.08
CDX71278 Canola cytosol, peroxisome, plasma membrane 75.19 38.26
CDY46211 Canola cytosol, peroxisome, plasma membrane 74.81 38.07
VIT_03s0063g02640.t01 Wine grape plasma membrane 74.03 37.9
CDY49290 Canola endoplasmic reticulum, golgi 62.02 37.83
CDX72475 Canola endoplasmic reticulum, golgi 61.63 37.59
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 68.6 37.5
CDY21665 Canola plasma membrane 73.26 37.06
CDX81929 Canola plasma membrane 72.87 36.86
Os05t0568000-02 Rice plasma membrane 72.09 36.19
CDY29431 Canola plasma membrane 67.44 35.95
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 58.53 35.78
Zm00001d009608_P001 Maize plasma membrane 69.77 35.64
Zm00001d039053_P001 Maize plasma membrane 70.16 35.21
CDY26665 Canola cytosol, peroxisome, plasma membrane 67.44 35.15
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 70.16 34.81
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 63.18 34.61
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 51.94 34.45
TraesCS1A01G406200.1 Wheat plasma membrane 68.6 33.91
TraesCS1D01G414600.1 Wheat peroxisome 68.99 33.9
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 68.99 33.9
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 59.69 33.33
CDY07381 Canola plasma membrane 62.79 32.6
CDY04232 Canola plasma membrane 62.4 32.39
CDX70186 Canola plastid 64.34 32.36
CDX89834 Canola plasma membrane 64.73 32.05
CDX98800 Canola plastid 64.34 32.05
CDY42109 Canola plasma membrane 61.63 31.99
CDY14892 Canola endoplasmic reticulum, golgi, plastid 65.12 31.94
CDX96912 Canola endoplasmic reticulum, golgi, plastid 65.12 31.88
CDY18212 Canola plasma membrane 64.73 31.57
CDY05644 Canola plasma membrane, plastid, vacuole 54.26 30.63
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 53.1 30.51
CDY33931 Canola plastid 53.88 30.42
CDY37951 Canola endoplasmic reticulum, plasma membrane 52.71 30.29
HORVU1Hr1G089710.3 Barley plastid 68.99 30.22
CDY37475 Canola plasma membrane 55.43 29.92
CDY49219 Canola endoplasmic reticulum, plasma membrane 52.33 29.8
CDY32443 Canola plasma membrane 55.04 29.71
CDX68323 Canola endoplasmic reticulum, golgi 51.55 29.49
CDX90012 Canola cytosol 59.69 29.11
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 56.98 27.63
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 57.75 27.14
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 57.36 27.01
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 56.98 26.87
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 61.24 24.8
CDY41551 Canola golgi 60.08 24.64
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078F758UniProt:A0A078F758InterPro:ACP_syn_III_CEnsemblPlants:CDY10355ProteinID:CDY10355ProteinID:CDY10355.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740
GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00032255001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PANTHER:PTHR31561
PANTHER:PTHR31561:SF23MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901InterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EF2D65::
Description
BnaCnng02560DBnaCnng02560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F758]
Coordinates
chrLK032003:+:4263..5135
Molecular Weight (calculated)
28296.0 Da
IEP (calculated)
9.908
GRAVY (calculated)
-0.278
Length
258 amino acids
Sequence
(BLAST)
001: MVVNKYKLRS NIKSINLGGM GCSAGVIAID LAKDLLQVHK NTYALVVSTE NISRNAYAGD NKSMIVANCL FRLGGAAILL SNKSEDRRRS KYKLLHTVRT
101: HTGADDKSFR CVQQEDDDKG KTGISLTKDI TSVAGRTITK NIATLGPLRA IDHFCIHAGG RALIDELEKS LGLSPVDVEP SRSTLHRFGN TSSSSIWYEL
201: AYTEAKGRMK KGNKAWQIAL GSGFKCNSAV WVALRDVNPS VNSPWEHCID KYPVKLDL
Best Arabidopsis Sequence Match ( AT2G15090.1 )
(BLAST)
001: MKNLKMVFFK ILFISLMAGL AMKGSKINVE DLQKFSLHHT QNNLQTISLL LFLVVFVWIL YMLTRPKPVY LVDFSCYLPP SHLKVSIQTL MGHARRAREA
101: GMCWKNKESD HLVDFQEKIL ERSGLGQETY IPEGLQCFPL QQGMGASRKE TEEVIFGALD NLFRNTGVKP DDIGILVVNS STFNPTPSLA SMIVNKYKLR
201: DNIKSLNLGG MGCSAGVIAV DVAKGLLQVH RNTYAIVVST ENITQNLYLG KNKSMLVTNC LFRVGGAAVL LSNRSRDRNR AKYELVHTVR IHTGSDDRSF
301: ECATQEEDED GIIGVTLTKN LPMVAARTLK INIATLGPLV LPLKEKLAFF ITFVKKKYFK PELRNYTPDF KLAFEHFCIH AGGRALIDEL EKNLKLSPLH
401: VEASRMTLHR FGNTSSSSIW YELAYTEAKG RMKEGDRIWQ IALGSGFKCN SSVWVALRDV KPSANSPWED CMDRYPVEID I
Arabidopsis Description
KCS83-ketoacyl-CoA synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3C9]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.