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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49290 Canola endoplasmic reticulum, golgi 96.22 96.22
Bra017641.1-P Field mustard golgi 95.04 83.4
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 85.34 77.8
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 85.11 77.59
AT4G34250.1 Thale cress endoplasmic reticulum, golgi 82.51 70.79
CDY47458 Canola cytosol 8.04 68.0
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 72.1 63.94
CDY10355 Canola cytosol 37.59 61.63
CDX89699 Canola cytosol 43.97 57.23
KRH51526 Soybean plasma membrane 57.68 55.08
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 56.03 54.99
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 57.68 54.83
CDX76286 Canola golgi 59.81 53.38
CDY46243 Canola golgi 59.81 53.38
CDY17465 Canola plasma membrane 59.1 52.63
VIT_03s0063g02640.t01 Wine grape plasma membrane 62.65 52.58
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 56.74 51.95
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 61.47 51.38
CDX94721 Canola cytosol 47.99 51.26
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 46.81 50.9
CDX71278 Canola cytosol, peroxisome, plasma membrane 60.99 50.89
Zm00001d009608_P001 Maize plasma membrane 60.52 50.69
CDY46211 Canola cytosol, peroxisome, plasma membrane 60.52 50.49
CDY15199 Canola cytosol 40.43 50.29
Zm00001d039053_P001 Maize plasma membrane 60.52 49.81
Os05t0568000-02 Rice plasma membrane 60.28 49.61
CDX81929 Canola plasma membrane 59.81 49.61
CDY21665 Canola plasma membrane 59.81 49.61
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 49.41 49.53
CDY63070 Canola cytosol 43.03 49.46
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 48.94 49.4
CDY29431 Canola plasma membrane 56.5 49.38
CDY26665 Canola cytosol, peroxisome, plasma membrane 57.45 49.09
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 60.05 48.85
TraesCS1A01G406200.1 Wheat plasma membrane 59.57 48.28
TraesCS1D01G414600.1 Wheat peroxisome 59.57 48.0
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 59.57 48.0
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 53.43 47.98
CDX70186 Canola plastid 56.03 46.2
CDX98800 Canola plastid 56.03 45.75
CDY14892 Canola endoplasmic reticulum, golgi, plastid 55.79 44.87
CDX96912 Canola endoplasmic reticulum, golgi, plastid 55.56 44.59
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 48.7 43.64
CDX89834 Canola plasma membrane 53.66 43.57
CDY07381 Canola plasma membrane 50.83 43.26
CDY04232 Canola plasma membrane 50.83 43.26
HORVU1Hr1G089710.3 Barley plastid 59.57 42.78
CDY42109 Canola plasma membrane 50.12 42.66
CDY18212 Canola plasma membrane 53.19 42.53
CDX90012 Canola cytosol 50.59 40.45
CDY37475 Canola plasma membrane 44.68 39.54
CDY32443 Canola plasma membrane 44.44 39.33
CDY37951 Canola endoplasmic reticulum, plasma membrane 41.61 39.2
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 41.37 38.98
CDY49219 Canola endoplasmic reticulum, plasma membrane 40.9 38.19
CDX68323 Canola endoplasmic reticulum, golgi 40.43 37.92
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 45.63 36.28
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 46.57 35.95
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 46.34 35.83
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 45.86 35.34
CDY33931 Canola plastid 37.35 34.57
CDY05644 Canola plasma membrane, plastid, vacuole 37.35 34.57
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.12 33.28
CDY41551 Canola golgi 49.41 33.23
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078C6M0InterPro:ACP_syn_III_CEnsemblPlants:CDX72475ProteinID:CDX72475ProteinID:CDX72475.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00100001001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF23MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EF3551:
Description
BnaC07g44970D
Coordinates
chrLK031796:+:1483555..1485003
Molecular Weight (calculated)
47618.7 Da
IEP (calculated)
8.730
GRAVY (calculated)
-0.092
Length
423 amino acids
Sequence
(BLAST)
001: MFFNYLMTHR LKLCFLPLLV AIAMQASRLS TQDLHSFHLY LQKNFTSLTI FSISLILGWT LYIMNRPKPV YLVDFSCYLP PSHLKASVKK IMHHVRVVRE
101: SGKWGKSDEN EYLMDFVTKI LERSGLGQET YVPEGLHCLP IEQTMVGSRK ETEEVILGAV DTLFRNTGVS PSDIGILVVN SSTFNPTPSA GVIAIDVAKS
201: LLQVHRNTYA LVVSTENITQ NLYAGNNKSM LVTNCLFRVG GAAVLLSNIS KDRKSAKYKL VHTVRVHTGS DDRSYGCATQ EEDEDGVVGV TLSKDLPMKF
301: FNPKIKHYMP DFKLAFEHFC IHVGGRALID ELEKNLHLSP LHVEASRMTL HRFGNTSSSS IWYELAYTEA KGRMKKGDRT WQIAVGSGFK CNSCVWVALR
401: NVKASANNPW EECLNKYPVE IDI
Best Arabidopsis Sequence Match ( AT4G34250.1 )
(BLAST)
001: MDYPMKKVKI FFNYLMAHRF KLCFLPLMVA IAVEASRLST QDLQNFYLYL QNNHTSLTMF FLYLALGSTL YLMTRPKPVY LVDFSCYLPP SHLKASTQRI
101: MQHVRLVREA GAWKQESDYL MDFCEKILER SGLGQETYVP EGLQTLPLQQ NLAVSRIETE EVIIGAVDNL FRNTGISPSD IGILVVNSST FNPTPSLSSI
201: LVNKFKLRDN IKSLNLGGMG CSAGVIAIDA AKSLLQVHRN TYALVVSTEN ITQNLYMGNN KSMLVTNCLF RIGGAAILLS NRSIDRKRAK YELVHTVRVH
301: TGADDRSYEC ATQEEDEDGI VGVSLSKNLP MVAARTLKIN IATLGPLVLP ISEKFHFFVR FVKKKFLNPK LKHYIPDFKL AFEHFCIHAG GRALIDEMEK
401: NLHLTPLDVE ASRMTLHRFG NTSSSSIWYE LAYTEAKGRM TKGDRIWQIA LGSGFKCNSS VWVALRNVKP STNNPWEQCL HKYPVEIDID LKE
Arabidopsis Description
KCS163-ketoacyl-CoA synthase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYZ0]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.