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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:endoplasmic reticulum, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47458 Canola cytosol 9.75 92.0
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 67.37 81.75
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 78.6 81.36
CDX89699 Canola cytosol 55.3 80.31
CDX71278 Canola cytosol, peroxisome, plasma membrane 84.96 79.09
CDY46211 Canola cytosol, peroxisome, plasma membrane 84.53 78.7
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 82.84 76.37
CDY10355 Canola cytosol 37.5 68.6
VIT_03s0063g02640.t01 Wine grape plasma membrane 70.76 66.27
CDY29431 Canola plasma membrane 67.8 66.12
KRH51526 Soybean plasma membrane 61.65 65.69
CDY26665 Canola cytosol, peroxisome, plasma membrane 68.86 65.66
CDX76286 Canola golgi 65.25 64.98
CDY46243 Canola golgi 64.41 64.14
CDX81929 Canola plasma membrane 69.28 64.12
CDY21665 Canola plasma membrane 68.86 63.73
Zm00001d009608_P001 Maize plasma membrane 67.58 63.17
Zm00001d039053_P001 Maize plasma membrane 68.64 63.03
Os05t0568000-02 Rice plasma membrane 68.64 63.03
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 68.86 62.5
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 60.38 61.69
TraesCS1D01G414600.1 Wheat peroxisome 68.01 61.14
TraesCS1A01G406200.1 Wheat plasma membrane 67.58 61.11
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 67.8 60.95
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 52.97 59.24
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 58.47 58.6
CDX94721 Canola cytosol 47.88 57.07
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 52.12 55.28
CDY15199 Canola cytosol 39.41 54.71
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 49.79 54.52
HORVU1Hr1G089710.3 Barley plastid 67.8 54.33
CDX70186 Canola plastid 57.84 53.22
CDX98800 Canola plastid 58.05 52.9
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 46.61 52.51
CDY17465 Canola plasma membrane 52.75 52.42
CDY07381 Canola plasma membrane 54.87 52.11
CDX89834 Canola plasma membrane 57.42 52.02
CDY14892 Canola endoplasmic reticulum, golgi, plastid 57.84 51.9
CDX96912 Canola endoplasmic reticulum, golgi, plastid 57.84 51.8
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 55.51 51.78
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 50.85 51.72
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 50.85 51.72
CDY63070 Canola cytosol 40.25 51.63
CDY04232 Canola plasma membrane 54.24 51.51
CDY18212 Canola plasma membrane 57.2 51.04
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 51.27 50.73
CDY42109 Canola plasma membrane 52.54 49.9
CDY49290 Canola endoplasmic reticulum, golgi 43.86 48.94
CDX72475 Canola endoplasmic reticulum, golgi 43.64 48.7
CDX90012 Canola cytosol 49.36 44.05
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 48.31 42.86
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 48.94 42.08
CDY32443 Canola plasma membrane 42.37 41.84
CDY37475 Canola plasma membrane 42.37 41.84
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 48.52 41.79
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 48.31 41.68
CDY37951 Canola endoplasmic reticulum, plasma membrane 36.23 38.08
CDY05644 Canola plasma membrane, plastid, vacuole 36.86 38.07
CDY33931 Canola plastid 36.65 37.86
CDY49219 Canola endoplasmic reticulum, plasma membrane 36.23 37.75
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 35.81 37.64
CDX68323 Canola endoplasmic reticulum, golgi 35.81 37.47
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 43.22 32.03
CDY41551 Canola golgi 42.37 31.8
CDY49218 Canola plasma membrane 0.42 0.7
Protein Annotations
KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1GO:A0A078GNJ4
UniProt:A0A078GNJ4EnsemblPlants:CDY26762ProteinID:CDY26762ProteinID:CDY26762.1InterPro:Chalcone/stilbene_synth_CInterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00035688001InterPro:IPR016039PFAM:PF02797PFAM:PF08392
PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF65MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433
MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724
MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EAB315
Description
BnaC09g08890D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A078GNJ4]
Coordinates
chrLK032194:+:69218..70753
Molecular Weight (calculated)
53427.2 Da
IEP (calculated)
9.937
GRAVY (calculated)
-0.090
Length
472 amino acids
Sequence
(BLAST)
001: MEAAEPVNGG SVQIQNENTS RKLPNFLQSV NMKYVKLGYH HLIKQLFKLC LVPLMAVVIS EISRLTQDDF HKLWLHLQYN LVSFILLSAL AVFGCTVFVM
101: TGPRSVYLVD YSCYLPPESL RVPYKNFMDH SKVIEDFNES SLEFQRGRFS RDRVWEKRRI SLRVCTASLH APPWWPRVRK QSSLFNPTPS LSVMIVNKYK
201: LRGNVKSFNL GGMGCSAGVI SIDLAKDMLQ VHRKTYAVVV STENITQNWY FGNKKAMLIP NCLFRVGGTA VLLSNKASDR RRSKYMMVHT VRTHKGANEK
301: AFNCVYQEQD DNGKTGVSLS KDLMAIAGEA LKANITTLGP LVLPISEHIL FFATLVAKKL FNAKMKPYIP DFKLAFDHFC IHAGGRAMID ELEKNLELSL
401: THVEASGMTL HRFGNTSSSS IWIKKGDRVW QIAFGSGFKC NRAVLVALDD VKPSVSSPWE HCIDRYPVKL DY
Best Arabidopsis Sequence Match ( AT2G16280.1 )
(BLAST)
001: MEAANEPVNG GSVQIRTENN ERRKLPNFLQ SVNMKYVKLG YHYLITHLFK LCLVPLMAVL VTEISRLTTD DLYQIWLHLQ YNLVAFIFLS ALAIFGSTVY
101: IMSRPRSVYL VDYSCYLPPE SLQVKYQKFM DHSKLIEDFN ESSLEFQRKI LERSGLGEET YLPEALHCIP PRPTMMAARE ESEQVMFGAL DKLFENTKIN
201: PRDIGVLVVN CSLFNPTPSL SAMIVNKYKL RGNVKSFNLG GMGCSAGVIS IDLAKDMLQV HRNTYAVVVS TENITQNWYF GNKKAMLIPN CLFRVGGSAI
301: LLSNKGKDRR RSKYKLVHTV RTHKGAVEKA FNCVYQEQDD NGKTGVSLSK DLMAIAGEAL KANITTLGPL VLPISEQILF FMTLVTKKLF NSKLKPYIPD
401: FKLAFDHFCI HAGGRAVIDE LEKNLQLSQT HVEASRMTLH RFGNTSSSSI WYELAYIEAK GRMKKGNRVW QIAFGSGFKC NSAVWVALNN VKPSVSSPWE
501: HCIDRYPVKL DF
Arabidopsis Description
KCS93-ketoacyl-CoA synthase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIX1]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.