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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015296.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 98.87 98.87
CDX89834 Canola plasma membrane 97.16 98.66
CDX94721 Canola cytosol 70.51 94.19
AT1G04220.1 Thale cress plasma membrane 92.44 92.61
CDY63070 Canola cytosol 63.52 91.3
CDY14892 Canola endoplasmic reticulum, golgi, plastid 86.2 86.69
CDX96912 Canola endoplasmic reticulum, golgi, plastid 86.01 86.34
CDY15199 Canola cytosol 47.07 73.24
Os11t0591200-01 Rice mitochondrion 59.36 72.69
CDX89699 Canola cytosol 44.61 72.62
CDX70186 Canola plastid 67.86 69.98
PGSC0003DMT400042065 Potato cytosol 48.77 69.35
CDX98800 Canola plastid 67.86 69.31
TraesCS6A01G073300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 66.16 68.9
TraesCS6B01G098300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 65.97 68.03
TraesCS4D01G148300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 65.78 67.97
TraesCS4A01G164400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 64.65 66.8
Zm00001d048953_P001 Maize mitochondrion, plastid 64.08 66.08
KXG28804 Sorghum plastid 64.84 65.71
PGSC0003DMT400014188 Potato endoplasmic reticulum, golgi, plasma membrane 60.68 65.11
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 60.49 64.91
CDY10355 Canola cytosol 31.57 64.73
TraesCS6D01G071600.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 65.97 64.04
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 46.88 63.75
PGSC0003DMT400042071 Potato plasma membrane 58.79 63.73
GSMUA_Achr3P15310_001 Banana cytosol, nucleus, plastid 58.6 63.52
CDX81929 Canola plasma membrane 60.87 63.14
PGSC0003DMT400041959 Potato endoplasmic reticulum, golgi, vacuole 52.36 63.1
CDY21665 Canola plasma membrane 60.68 62.94
Solyc06g053870.2.1 Tomato mitochondrion 57.66 62.76
CDX71278 Canola cytosol, peroxisome, plasma membrane 60.11 62.72
CDY29431 Canola plasma membrane 57.28 62.6
CDY46211 Canola cytosol, peroxisome, plasma membrane 59.74 62.33
CDX76286 Canola golgi 55.58 62.03
CDY46243 Canola golgi 55.58 62.03
CDY26665 Canola cytosol, peroxisome, plasma membrane 57.66 61.62
PGSC0003DMT400041960 Potato endoplasmic reticulum, golgi, vacuole 51.04 60.27
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 55.58 59.39
CDY07381 Canola plasma membrane 55.01 58.55
KRH04744 Soybean endoplasmic reticulum, plasma membrane, vacuole 51.61 58.46
CDX90012 Canola cytosol 58.03 58.03
CDY47458 Canola cytosol 5.48 58.0
CDY04232 Canola plasma membrane 54.44 57.95
EES08876 Sorghum cytosol, endoplasmic reticulum, plasma membrane 58.03 57.71
KRH57768 Soybean plasma membrane 51.04 57.57
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 50.28 57.33
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 51.04 57.2
CDY42109 Canola plasma membrane 53.69 57.14
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 51.04 56.6
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 49.53 56.47
CDY37475 Canola plasma membrane 50.66 56.07
CDY32443 Canola plasma membrane 50.28 55.65
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 44.8 54.99
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 46.12 54.83
CDY17465 Canola plasma membrane 49.15 54.74
CDX72475 Canola endoplasmic reticulum, golgi 42.53 53.19
CDY49290 Canola endoplasmic reticulum, golgi 42.34 52.96
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 50.09 52.37
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 53.5 51.64
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 51.61 51.32
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 52.55 50.82
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 52.36 50.46
CDY49219 Canola endoplasmic reticulum, plasma membrane 39.89 46.58
CDY37951 Canola endoplasmic reticulum, plasma membrane 39.51 46.55
CDX68323 Canola endoplasmic reticulum, golgi 39.51 46.34
CDY05644 Canola plasma membrane, plastid, vacuole 39.89 46.17
CDY33931 Canola plastid 39.7 45.95
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 38.94 45.88
CDY41551 Canola golgi 50.09 42.13
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.09 41.6
CDY49218 Canola plasma membrane 0.38 0.7
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078FZL7UniProt:A0A078FZL7InterPro:ACP_syn_III_CEnsemblPlants:CDY18212ProteinID:CDY18212ProteinID:CDY18212.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00002741001InterPro:IPR016039PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF25MetaCyc:PWY-4381MetaCyc:PWY-5080
MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602
MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-like
UniPathway:UPA00094UniParc:UPI0004EE59B4SEG:seg:::
Description
BnaC05g02350D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A078FZL7]
Coordinates
chrLK032083:-:325261..328809
Molecular Weight (calculated)
59586.3 Da
IEP (calculated)
9.515
GRAVY (calculated)
-0.072
Length
529 amino acids
Sequence
(BLAST)
001: MNENHIQSAN NNNSQVTTVD VTNQKLPNFL LSVRLKYVKL GYHYLISNAV YIIILPVLFA ATSSSFKLSD LTLLFNHLLH FHLLPSSLFA VLLIFLTTLY
101: FTTRPRKVFL LDFACYKPDP SLICTRETFM DRSQRVGIFT EDNLAFQQKI LERSGLGQKT YFPEALLRVP PNPCMSEARK EAETVMFGAI DAVLEKTGVK
201: PKDIGILVVN CSLFNPTPSL SAMIVNKYKL RGNILSYNLG GMGCSAGLIS IDLAKQLLQV QANSYALVVS TENITLNWYL GNDRSMLLSN CIFRMGGAAV
301: LLSNRSSDRR RSKYQLIHTV RTHKGADDNA FNCVYQREDN NDNNKIGVSL SKNLMAIAGE ALKTNITTLG PLVLPMSEQL LFFMTLVARK VFKVKKIKPY
401: IPDFKLAFEH FCIHAGGRAV LDEIEKNLDL SEWHMEPSRM TLNRFGNTSS SSLWYELAYS EAKGRIKRGD RTWQIAFGSG FKCNSAVWRA LTSIDPSKEE
501: KTNPWIDEIH EFPVQVPRVS LVSSSSESR
Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Arabidopsis Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.