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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47458 Canola cytosol 13.85 90.0
CDY10355 Canola cytosol 58.15 73.26
CDY15199 Canola cytosol 64.92 62.06
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 73.54 61.44
CDX71278 Canola cytosol, peroxisome, plasma membrane 94.77 60.75
CDY46211 Canola cytosol, peroxisome, plasma membrane 94.46 60.55
KRH51526 Soybean plasma membrane 82.46 60.5
CDX94721 Canola cytosol 73.23 60.1
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 92.62 58.79
CDX76286 Canola golgi 83.38 57.17
CDY46243 Canola golgi 83.08 56.96
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 80.31 55.3
VIT_03s0063g02640.t01 Wine grape plasma membrane 84.62 54.56
CDY63070 Canola cytosol 61.23 54.08
CDY21665 Canola plasma membrane 84.0 53.53
CDX81929 Canola plasma membrane 83.69 53.33
CDY29431 Canola plasma membrane 79.08 53.1
Zm00001d009608_P001 Maize plasma membrane 81.85 52.67
Os05t0568000-02 Rice plasma membrane 82.46 52.14
Zm00001d039053_P001 Maize plasma membrane 82.15 51.95
CDY26665 Canola cytosol, peroxisome, plasma membrane 78.46 51.52
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 72.92 51.3
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 81.54 50.96
TraesCS1A01G406200.1 Wheat plasma membrane 80.31 50.0
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 80.31 49.71
TraesCS1D01G414600.1 Wheat peroxisome 80.31 49.71
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 63.69 49.4
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 69.85 48.92
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 69.54 48.71
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 64.0 48.26
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 68.62 47.35
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 61.23 47.16
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 64.31 46.97
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 68.92 46.96
CDY17465 Canola plasma membrane 68.62 46.95
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 72.62 46.64
CDX89834 Canola plasma membrane 72.92 45.49
CDY04232 Canola plasma membrane 69.23 45.27
CDY07381 Canola plasma membrane 69.23 45.27
CDY14892 Canola endoplasmic reticulum, golgi, plastid 73.23 45.25
CDX96912 Canola endoplasmic reticulum, golgi, plastid 72.92 44.97
CDY18212 Canola plasma membrane 72.62 44.61
CDY42109 Canola plasma membrane 68.0 44.47
HORVU1Hr1G089710.3 Barley plastid 80.0 44.14
CDX70186 Canola plastid 69.54 44.05
CDX72475 Canola endoplasmic reticulum, golgi 57.23 43.97
CDY49290 Canola endoplasmic reticulum, golgi 57.23 43.97
CDX98800 Canola plastid 69.54 43.63
CDX90012 Canola cytosol 64.92 39.89
CDY37475 Canola plasma membrane 57.54 39.12
CDY32443 Canola plasma membrane 57.54 39.12
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 62.15 37.97
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 62.46 37.04
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 62.15 36.93
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 62.15 36.79
CDY05644 Canola plasma membrane, plastid, vacuole 51.69 36.76
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 50.46 36.53
CDY37951 Canola endoplasmic reticulum, plasma membrane 50.46 36.53
CDY33931 Canola plastid 50.77 36.1
CDY49219 Canola endoplasmic reticulum, plasma membrane 50.15 35.98
CDX68323 Canola endoplasmic reticulum, golgi 49.85 35.92
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 60.92 31.08
CDY41551 Canola golgi 60.0 31.0
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078DMB5InterPro:ACP_syn_III_CEnsemblPlants:CDX89699ProteinID:CDX89699ProteinID:CDX89699.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00150104001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PANTHER:PTHR31561PANTHER:PTHR31561:SF23
MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036
MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901
InterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EBE073:::
Description
BnaC03g46130D
Coordinates
chrLK031860:+:917515..918492
Molecular Weight (calculated)
36218.1 Da
IEP (calculated)
9.796
GRAVY (calculated)
-0.074
Length
325 amino acids
Sequence
(BLAST)
001: MFGCLDKLFE NTKINPRDIS VLVVNCSLFN PTPSLSAMIV NKYRLRGNVK SFNLGGMGCS AGVIAVDLAK DMLQVHRNTY AVVVSTENIT QNWYLGNKKA
101: MLISNCLFRV GGTAVLLSNK ASDRRRSKYK MVHTVRTHKG ADEKACVYQE EDDNGKTGVS LSKDLMAIAG EALKANITTL GPLVLPISEQ ILFFTTLVAK
201: KLFSAKVKPY IPDFKLVFDH FCIHAGGRAV IDELEKNLQL SETHVEASRM TLHRFGNTSS SSIWYELPYI EAKGRMKKGN RVWQIAFGSG FKCNSAVWVV
301: LPNVKPSVSS PWEHCIDRYP VKLDF
Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Arabidopsis Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.