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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
iPSORT:plastid
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039053_P001 Maize plasma membrane 95.45 93.77
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 93.86 91.15
Os05t0568000-02 Rice plasma membrane 90.1 88.52
TraesCS1A01G406200.1 Wheat plasma membrane 89.7 86.78
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 90.1 86.67
TraesCS1D01G414600.1 Wheat peroxisome 89.7 86.29
CDX89699 Canola cytosol 52.67 81.85
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 66.73 79.86
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 72.08 78.79
VIT_18s0001g12550.t01 Wine grape cytosol, peroxisome, plasma membrane 78.22 77.6
HORVU1Hr1G089710.3 Barley plastid 89.7 76.91
Bra025738.1-P Field mustard plasma membrane 77.03 76.88
CDY29431 Canola plasma membrane 73.66 76.86
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 78.61 76.79
CDX81929 Canola plasma membrane 77.43 76.67
CDY21665 Canola plasma membrane 77.43 76.67
Bra031081.1-P Field mustard plasma membrane 77.43 76.52
PGSC0003DMT400009451 Potato cytosol, peroxisome, plasma membrane 78.61 76.49
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 71.09 76.22
AT1G19440.1 Thale cress golgi, peroxisome, plasma membrane 77.82 76.16
KRH51526 Soybean plasma membrane 66.73 76.07
KRH15203 Soybean plasma membrane 76.63 75.88
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 68.51 75.88
KRH05829 Soybean cytosol, peroxisome, plasma membrane 77.03 75.83
CDY26665 Canola cytosol, peroxisome, plasma membrane 74.26 75.76
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 57.82 75.06
CDY47458 Canola cytosol 7.33 74.0
CDX71278 Canola cytosol, peroxisome, plasma membrane 74.26 73.96
CDY46211 Canola cytosol, peroxisome, plasma membrane 74.26 73.96
Bra001974.1-P Field mustard cytosol, peroxisome, plasma membrane 74.06 73.77
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 74.46 73.44
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 59.21 71.36
CDY10355 Canola cytosol 35.64 69.77
CDX76286 Canola golgi 64.75 68.99
CDY46243 Canola golgi 64.55 68.78
AT4G34510.1 Thale cress plasma membrane 65.94 68.38
Bra034634.1-P Field mustard golgi 63.96 68.14
Zm00001d016438_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane 69.7 68.09
Zm00001d039094_P001 Maize cytosol 68.32 67.78
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 63.17 67.58
Zm00001d048061_P001 Maize golgi 65.74 67.21
Zm00001d046444_P001 Maize plasma membrane 66.93 65.63
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 64.16 65.59
Zm00001d045660_P001 Maize mitochondrion 36.04 62.54
Bra036405.1-P Field mustard cytosol, plasma membrane, plastid 56.24 61.61
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 52.28 61.25
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 56.04 60.99
AT2G15090.1 Thale cress golgi 58.02 60.91
Bra017641.1-P Field mustard golgi 58.02 60.79
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.84 60.78
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 53.47 60.67
CDY17465 Canola plasma membrane 57.03 60.63
CDX72475 Canola endoplasmic reticulum, golgi 50.69 60.52
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 56.83 60.17
Zm00001d037328_P001 Maize cytosol 43.56 59.95
AT4G34250.1 Thale cress endoplasmic reticulum, golgi 58.22 59.63
CDY49290 Canola endoplasmic reticulum, golgi 49.9 59.57
Bra034635.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 59.6 59.49
Bra013081.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 57.23 59.34
AT4G34520.1 Thale cress golgi 59.41 59.29
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 59.21 59.09
Zm00001d048953_P001 Maize mitochondrion, plastid 58.61 57.7
Zm00001d027904_P001 Maize plastid 60.59 56.35
Zm00001d030343_P001 Maize cytosol, peroxisome, plasma membrane 58.81 55.51
Zm00001d051787_P001 Maize mitochondrion 52.48 54.64
Zm00001d047931_P001 Maize peroxisome 57.03 52.75
Zm00001d017941_P001 Maize plasma membrane 51.49 52.74
Zm00001d028406_P001 Maize peroxisome 56.83 52.47
Zm00001d032948_P001 Maize endoplasmic reticulum, golgi, plasma membrane 49.9 50.91
Zm00001d014168_P001 Maize peroxisome, plasma membrane, plastid 49.9 49.9
Zm00001d027766_P001 Maize mitochondrion 50.1 47.83
Zm00001d009354_P001 Maize endoplasmic reticulum 44.36 46.09
Zm00001d044580_P001 Maize mitochondrion 44.16 45.79
Zm00001d044579_P001 Maize golgi 43.96 44.94
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
ProteinID:AQK92273.1InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629
GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039UniProt:K7VT98
PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF65SUPFAM:SSF53901
TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0001CABF36EnsemblPlantsGene:Zm00001d009608EnsemblPlants:Zm00001d009608_P001EnsemblPlants:Zm00001d009608_T001
SEG:seg:::::
Description
3-ketoacyl-CoA synthase
Coordinates
chr8:-:72951538..72953055
Molecular Weight (calculated)
56295.5 Da
IEP (calculated)
9.638
GRAVY (calculated)
-0.016
Length
505 amino acids
Sequence
(BLAST)
001: MDGVSAPPPH RRLPDFLQSV NLKYVKLGYH YLITHLLTLT LLPLIAVILL EAGRTDPDDL RQLWLHLQYN LVSVLVLSAV LVFGATVYAL TRPRPVYLVD
101: FACYRPPAHL RVRFDQFMRH SRLCGFSDDA LEFQRKILER SGLSEETYVP EAMHALPPQP TMANARAEAE AVMFGALDAL FRSTGVKPKD VGVLVVNCSL
201: FNPTPSLSAM VVNRYRLRGN VRSFNLGGMG CSAGVIAVDL ARDMLQVHRA TYAVVVSTEN ITQNWYFGNR KSMLIPNCLF RVGGAAVLLS NRGADRRRAK
301: YVLRHVVRTH KGADDRAFGC VYQEQDGEGK TGVSLSKDLM AIAGGALKTN ITTLGPLVLP VSEQLLFFAT LVAKKLLSAK TKPYIPDFKL AFEHFCIHAG
401: GRAVIDELEK NLQLSPAHVE ASRMTLHRFG NTSSSSIWYE LAYMEAKGRV RRGHRVWQIA FGSGFKCNSA VWHALRNVKP SPDSPWEDCI DRYPVELVDG
501: FPTQQ
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.