Factsheet for AT2G16280.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	golgi, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47458	Canola	cytosol	9.18	94.0
CDX89699	Canola	cytosol	58.79	92.62
CDY46211	Canola	cytosol, peroxisome, plasma membrane	91.41	92.31
CDX71278	Canola	cytosol, peroxisome, plasma membrane	91.41	92.31
Bra001974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	91.21	92.11
Bra037304.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	80.66	90.57
CDY47457	Canola	cytosol, endoplasmic reticulum, plasma membrane	67.38	88.69
CDY26762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	76.37	82.84
AT4G34510.1	Thale cress	plasma membrane	77.34	81.31
VIT_03s0063g02640.t01	Wine grape	plasma membrane	78.12	79.37
KRH51526	Soybean	plasma membrane	67.77	78.33
AT1G19440.1	Thale cress	golgi, peroxisome, plasma membrane	76.76	76.16
Os05t0568000-02	Rice	plasma membrane	75.39	75.1
GSMUA_Achr2P08980_001	Banana	golgi, peroxisome, plasma membrane	67.58	74.89
Zm00001d009608_P001	Maize	plasma membrane	73.44	74.46
Zm00001d039053_P001	Maize	plasma membrane	74.61	74.32
EES19964	Sorghum	endoplasmic reticulum, plasma membrane, plastid	75.0	73.85
GSMUA_Achr6P27270_001	Banana	cytosol, peroxisome, plasma membrane	60.35	73.22
TraesCS1A01G406200.1	Wheat	plasma membrane	74.02	72.61
TraesCS1D01G414600.1	Wheat	peroxisome	74.22	72.38
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	74.22	72.38
GSMUA_Achr9P06980_001	Banana	cytosol, golgi, peroxisome	65.23	70.91
GSMUA_Achr5P09090_001	Banana	golgi, peroxisome, plasma membrane	54.88	67.06
AT4G34520.1	Thale cress	golgi	63.67	64.43
HORVU1Hr1G089710.3	Barley	plastid	74.02	64.35
AT2G26640.1	Thale cress	plasma membrane	63.09	63.46
AT1G68530.1	Thale cress	plasma membrane	60.55	62.37
AT1G25450.1	Thale cress	plasma membrane	59.38	61.79
AT2G15090.1	Thale cress	golgi	57.62	61.33
AT5G43760.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	62.5	60.49
AT4G34250.1	Thale cress	endoplasmic reticulum, golgi	58.2	60.45
AT1G04220.1	Thale cress	plasma membrane	61.33	59.47
AT1G01120.1	Thale cress	plasma membrane	55.47	53.79
AT3G10280.1	Thale cress	endoplasmic reticulum, plasma membrane	47.07	52.51
AT2G46720.1	Thale cress	endoplasmic reticulum, plasma membrane	47.66	52.36
AT2G26250.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	54.49	50.73
AT1G71160.1	Thale cress	endoplasmic reticulum, plasma membrane	40.82	45.43
AT5G49070.1	Thale cress	plasma membrane, vacuole	39.45	43.53

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	EntrezGene:816124
ProteinID:AAD22309.1	InterPro:ACP_syn_III_C	ProteinID:AEC06480.1	EMBL:AK226284	ArrayExpress:AT2G16280	EnsemblPlantsGene:AT2G16280
RefSeq:AT2G16280	TAIR:AT2G16280	RefSeq:AT2G16280-TAIR-G	EnsemblPlants:AT2G16280.1	TAIR:AT2G16280.1	Unigene:At.20689
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006629	GO:GO:0006633	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009416	GO:GO:0009628
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
GO:GO:0102336	GO:GO:0102337	GO:GO:0102338	GO:GO:0102756	InterPro:IPR016039	Symbol:KCS9
RefSeq:NP_179223.1	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PO:PO:0000013	PO:PO:0000014
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PANTHER:PTHR31561	PANTHER:PTHR31561:SF65	UniProt:Q9SIX1	SUPFAM:SSF53901	TMHMM:TMhelix
InterPro:Thiolase-like	UniParc:UPI000004851E	:	:	:	:

Description

KCS93-ketoacyl-CoA synthase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIX1]

Coordinates

chr2:+:7050799..7052951

Molecular Weight (calculated)

57976.6 Da

IEP (calculated)

9.441

GRAVY (calculated)

-0.100

Length

512 amino acids

Sequence
(BLAST)

001: MEAANEPVNG GSVQIRTENN ERRKLPNFLQ SVNMKYVKLG YHYLITHLFK LCLVPLMAVL VTEISRLTTD DLYQIWLHLQ YNLVAFIFLS ALAIFGSTVY
101: IMSRPRSVYL VDYSCYLPPE SLQVKYQKFM DHSKLIEDFN ESSLEFQRKI LERSGLGEET YLPEALHCIP PRPTMMAARE ESEQVMFGAL DKLFENTKIN
201: PRDIGVLVVN CSLFNPTPSL SAMIVNKYKL RGNVKSFNLG GMGCSAGVIS IDLAKDMLQV HRNTYAVVVS TENITQNWYF GNKKAMLIPN CLFRVGGSAI
301: LLSNKGKDRR RSKYKLVHTV RTHKGAVEKA FNCVYQEQDD NGKTGVSLSK DLMAIAGEAL KANITTLGPL VLPISEQILF FMTLVTKKLF NSKLKPYIPD
401: FKLAFDHFCI HAGGRAVIDE LEKNLQLSQT HVEASRMTLH RFGNTSSSSI WYELAYIEAK GRMKKGNRVW QIAFGSGFKC NSAVWVALNN VKPSVSSPWE
501: HCIDRYPVKL DF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.