Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89834 | Canola | plasma membrane | 92.05 | 93.28 |
| Bra015296.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 92.8 | 92.63 |
| CDY18212 | Canola | plasma membrane | 92.61 | 92.44 |
| CDY63070 | Canola | cytosol | 61.93 | 88.86 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 87.88 | 87.71 |
| Os11t0591200-01 | Rice | mitochondrion | 59.28 | 72.45 |
| AT2G26640.1 | Thale cress | plasma membrane | 68.18 | 70.73 |
| PGSC0003DMT400042065 | Potato | cytosol | 48.86 | 69.35 |
| TraesCS6A01G073300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 65.15 | 67.72 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 65.15 | 67.19 |
| TraesCS6B01G098300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 65.15 | 67.06 |
| Zm00001d048953_P001 | Maize | mitochondrion, plastid | 64.39 | 66.28 |
| TraesCS4A01G164400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 63.83 | 65.82 |
| KXG28804 | Sorghum | plastid | 64.96 | 65.71 |
| PGSC0003DMT400014188 | Potato | endoplasmic reticulum, golgi, plasma membrane | 60.04 | 64.3 |
| Solyc05g013220.2.1 | Tomato | endoplasmic reticulum, golgi, plastid | 59.66 | 63.89 |
| PGSC0003DMT400042071 | Potato | plasma membrane | 58.9 | 63.73 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 65.15 | 63.12 |
| GSMUA_Achr3P15310_001 | Banana | cytosol, nucleus, plastid | 58.14 | 62.91 |
| Solyc06g053870.2.1 | Tomato | mitochondrion | 57.58 | 62.55 |
| PGSC0003DMT400041959 | Potato | endoplasmic reticulum, golgi, vacuole | 51.89 | 62.41 |
| AT1G19440.1 | Thale cress | golgi, peroxisome, plasma membrane | 60.23 | 61.63 |
| AT4G34510.1 | Thale cress | plasma membrane | 56.63 | 61.4 |
| AT2G16280.1 | Thale cress | golgi, peroxisome, plasma membrane | 59.47 | 61.33 |
| PGSC0003DMT400041960 | Potato | endoplasmic reticulum, golgi, vacuole | 51.14 | 60.27 |
| Solyc06g053900.2.1 | Tomato | cytosol, plasma membrane, plastid | 55.11 | 58.79 |
| KRH04744 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 51.89 | 58.67 |
| KRH57768 | Soybean | plasma membrane | 51.33 | 57.78 |
| EES08876 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 58.14 | 57.71 |
| AT1G68530.1 | Thale cress | plasma membrane | 53.98 | 57.34 |
| AT1G01120.1 | Thale cress | plasma membrane | 57.2 | 57.2 |
| AT1G25450.1 | Thale cress | plasma membrane | 53.22 | 57.11 |
| AT2G46720.1 | Thale cress | endoplasmic reticulum, plasma membrane | 49.43 | 56.01 |
| AT2G15090.1 | Thale cress | golgi | 50.95 | 55.93 |
| AT3G10280.1 | Thale cress | endoplasmic reticulum, plasma membrane | 48.48 | 55.77 |
| AT4G34250.1 | Thale cress | endoplasmic reticulum, golgi | 50.95 | 54.56 |
| AT4G34520.1 | Thale cress | golgi | 50.19 | 52.37 |
| AT2G26250.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 52.46 | 50.36 |
| AT1G71160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 39.2 | 45.0 |
| AT5G49070.1 | Thale cress | plasma membrane, vacuole | 39.02 | 44.4 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | EntrezGene:839578 |
| UniProt:A0A178WF97 | ProteinID:AAC16740.1 | InterPro:ACP_syn_III_C | ProteinID:AEE27671.1 | EMBL:AK222101 | ArrayExpress:AT1G04220 |
| EnsemblPlantsGene:AT1G04220 | RefSeq:AT1G04220 | TAIR:AT1G04220 | RefSeq:AT1G04220-TAIR-G | EnsemblPlants:AT1G04220.1 | TAIR:AT1G04220.1 |
| EMBL:AY074518 | EMBL:BT015917 | CHEMBL:CHEMBL2242736 | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009628 | GO:GO:0009922 | GO:GO:0009987 |
| GO:GO:0010345 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 |
| GO:GO:0019748 | GO:GO:0102336 | GO:GO:0102337 | GO:GO:0102338 | GO:GO:0102756 | InterPro:IPR016039 |
| Symbol:KCS2 | RefSeq:NP_171918.1 | ProteinID:OAP16896.1 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31561 | PANTHER:PTHR31561:SF25 | UniProt:Q5XEP9 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like |
| UniParc:UPI00000481C0 | SEG:seg | : | : | : | : |
Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
Coordinates
chr1:-:1119699..1122786
Molecular Weight (calculated)
59531.2 Da
IEP (calculated)
9.581
GRAVY (calculated)
-0.112
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.