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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048953_P001 Maize mitochondrion, plastid 86.21 87.72
Os11t0591200-01 Rice mitochondrion 70.69 85.42
TraesCS6A01G073300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 78.54 80.71
TraesCS6B01G098300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 79.12 80.51
TraesCS4D01G148300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 78.74 80.27
TraesCS4A01G164400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 77.78 79.3
CDX94721 Canola cytosol 58.24 76.77
TraesCS6D01G071600.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 79.12 75.78
CDY63070 Canola cytosol 50.19 71.2
KRH34362 Soybean plasma membrane 68.39 69.05
KRG92437 Soybean plasma membrane 68.01 68.67
VIT_05s0020g04540.t01 Wine grape plasma membrane 67.82 67.95
KRH69063 Soybean endoplasmic reticulum, peroxisome, plasma membrane 67.62 67.75
KRH31633 Soybean endoplasmic reticulum, nucleus, plastid 66.67 67.31
Solyc09g083050.2.1 Tomato plasma membrane 65.9 67.06
PGSC0003DMT400034973 Potato plasma membrane 66.48 66.86
Solyc03g005320.2.1 Tomato plasma membrane 65.9 66.28
PGSC0003DMT400042065 Potato cytosol 47.13 66.13
EER88601 Sorghum endoplasmic reticulum, plasma membrane, plastid 65.33 66.09
PGSC0003DMT400015633 Potato plasma membrane 65.9 66.03
CDY14892 Canola endoplasmic reticulum, golgi, plastid 66.48 65.97
Bra033694.1-P Field mustard golgi, peroxisome, plastid 66.48 65.97
CDX89834 Canola plasma membrane 65.71 65.83
Bra035992.1-P Field mustard plasma membrane 66.28 65.78
CDX96912 Canola endoplasmic reticulum, golgi, plastid 66.28 65.65
AT5G43760.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 66.28 65.41
EES08876 Sorghum cytosol, endoplasmic reticulum, plasma membrane 66.28 65.04
Bra015296.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 65.9 65.03
AT1G04220.1 Thale cress plasma membrane 65.71 64.96
CDY18212 Canola plasma membrane 65.71 64.84
EES19987 Sorghum cytosol, endoplasmic reticulum, plastid 62.07 63.16
EES06493 Sorghum endoplasmic reticulum, peroxisome, plasma membrane, plastid 63.22 62.98
GSMUA_Achr3P15310_001 Banana cytosol, nucleus, plastid 56.32 60.25
PGSC0003DMT400041959 Potato endoplasmic reticulum, golgi, vacuole 49.04 58.31
Solyc06g053870.2.1 Tomato mitochondrion 54.21 58.23
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 57.85 58.08
PGSC0003DMT400014188 Potato endoplasmic reticulum, golgi, plasma membrane 54.21 57.4
PGSC0003DMT400042071 Potato plasma membrane 53.64 57.38
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 53.83 57.0
PGSC0003DMT400041960 Potato endoplasmic reticulum, golgi, vacuole 47.89 55.8
EER92628 Sorghum plasma membrane 52.49 55.47
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 50.96 53.74
KRH04744 Soybean endoplasmic reticulum, plasma membrane, vacuole 47.89 53.53
KRH57768 Soybean plasma membrane 47.89 53.3
EER95458 Sorghum mitochondrion 53.26 52.55
EER91722 Sorghum peroxisome 52.87 51.59
EER91618 Sorghum plastid 51.15 50.95
KXG30818 Sorghum golgi, mitochondrion 46.74 50.1
KXG39781 Sorghum peroxisome 52.3 49.73
EER89559 Sorghum mitochondrion, plasma membrane 46.36 49.39
KXG19727 Sorghum mitochondrion, plastid 45.59 48.28
EER89567 Sorghum endoplasmic reticulum, golgi, plastid 40.23 46.05
EER95395 Sorghum cytosol, peroxisome, plasma membrane 47.32 45.49
OQU76197 Sorghum golgi 41.0 44.68
KXG19733 Sorghum endoplasmic reticulum, plasma membrane, vacuole 40.42 43.87
EER88189 Sorghum endoplasmic reticulum, plasma membrane, vacuole 40.42 43.78
EES03073 Sorghum endoplasmic reticulum, golgi, plasma membrane 40.61 43.27
EES00849 Sorghum endoplasmic reticulum, golgi 40.42 42.71
EES19986 Sorghum cytosol 7.28 17.19
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1UniProt:A0A1B6PT04
InterPro:ACP_syn_III_CInterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629
GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039EnsemblPlants:KXG28804
ProteinID:KXG28804ProteinID:KXG28804.1PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF62MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
EnsemblPlantsGene:SORBI_3005G168700SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI00081AB3CFSEG:seg
Description
hypothetical protein
Coordinates
chr5:-:64756257..64758690
Molecular Weight (calculated)
57137.9 Da
IEP (calculated)
9.595
GRAVY (calculated)
-0.016
Length
522 amino acids
Sequence
(BLAST)
001: MSAAHQPEPT APAAAASCGG GGDSTIKNAR HRTSTLKQCY HLAISNALYL LLAPAVAYAS HRFSHHTASD VTSAAAFASN PPFAVSLLVL SAVLATAYLM
101: RRPRAVYLLD FACYKPGAGH VVTRETFMRQ SEAAGVFTPD NLAFQRKILE RSGLGQGTFF PAAVLNSPPN PCMAEARAEA EAVMFGAIDQ VLAKTGVRAR
201: DIGVVVVNCS LFNPTPSLSA MIVNHYKLRG NVASYNLGGM GCSAGLISID LAKQLLQVHR NTYALVVSME NITLNWYWGN NRSMLMSNCL FRMGGAAVLL
301: TNRGSDRHRS KYHLLHTVRT HHGADDRAYR CVFQEEDETG RVGVALSKDL MAVAGEALKT NITTLGPLAL PMSEQILFLA SLVARKVFGV RGLRPYIPDF
401: KMAFEHFCIH AGGRAVLDTI EKNLELSPWH MEPSRMTLYR WGNTSSSSLW YELAYTEAQG RVRRGHRAWQ IAFGSGFKCN SAVWRALRTI DPKKESAVGN
501: PWVEEIHRFP VEVPKVESVI VS
Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Arabidopsis Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.