CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045660_P001	Maize	mitochondrion	55.1	92.78
TraesCS4D01G008100.1	Wheat	plasma membrane	68.57	78.5
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	73.27	78.04
Os06t0262800-01	Rice	plasma membrane	78.37	77.73
TraesCS4B01G274700.1	Wheat	plastid	75.31	77.04
TraesCS4A01G031500.1	Wheat	plasma membrane	75.92	77.02
TraesCS4D01G273400.1	Wheat	endoplasmic reticulum	75.71	76.81
KXG30818	Sorghum	golgi, mitochondrion	75.71	76.18
KXG19727	Sorghum	mitochondrion, plastid	76.53	76.06
TraesCS7D01G519400.1	Wheat	plasma membrane	69.59	71.19
TraesCS7D01G035700.1	Wheat	plasma membrane	70.0	70.72
HORVU7Hr1G006910.1	Barley	plasma membrane	70.0	70.43
TraesCSU01G166100.1	Wheat	plasma membrane	70.41	70.12
TraesCS4A01G303900.1	Wheat	plasma membrane	70.41	70.12
TraesCS7D01G519300.1	Wheat	golgi, plasma membrane	68.37	70.08
TraesCS7B01G449300.1	Wheat	plasma membrane	67.96	69.67
TraesCS7A01G532300.1	Wheat	golgi	67.96	69.52
TraesCS7B01G449000.1	Wheat	golgi	67.76	68.17
KXG19733	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	63.67	64.86
TraesCS7A01G532200.1	Wheat	cytosol	13.27	62.5
EES03073	Sorghum	endoplasmic reticulum, golgi, plasma membrane	59.59	59.59
EER88189	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	57.96	58.92
KRH35956	Soybean	plasma membrane	59.18	58.47
KRG90814	Soybean	cytosol, golgi, plasma membrane	58.98	58.27
EES00849	Sorghum	endoplasmic reticulum, golgi	58.57	58.1
Solyc02g085870.2.1	Tomato	plasma membrane	58.78	58.06
EER92628	Sorghum	plasma membrane	58.37	57.89
PGSC0003DMT400032993	Potato	plasma membrane	58.57	57.86
OQU76197	Sorghum	golgi	56.53	57.83
CDY42109	Canola	plasma membrane	58.57	57.75
Bra024749.1-P	Field mustard	plasma membrane	58.57	57.75
PGSC0003DMT400037757	Potato	plastid	54.08	57.48
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	57.76	57.06
Bra004034.1-P	Field mustard	plasma membrane	57.14	56.91
VIT_14s0006g02990.t01	Wine grape	plasma membrane	57.14	56.91
Solyc02g063140.2.1	Tomato	golgi	57.55	56.85
EER89567	Sorghum	endoplasmic reticulum, golgi, plastid	52.86	56.8
AT1G25450.1	Thale cress	plasma membrane	56.94	56.71
CDY04232	Canola	plasma membrane	57.35	56.54
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	57.14	56.45
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	57.14	56.45
AT1G68530.1	Thale cress	plasma membrane	57.14	56.34
CDY07381	Canola	plasma membrane	57.14	56.34
GSMUA_Achr3P07400_001	Banana	plasma membrane	44.69	56.3
PGSC0003DMT400037714	Potato	plasma membrane	54.69	54.25
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	54.49	54.05
GSMUA_Achr5P05870_001	Banana	plasma membrane	45.92	53.57
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	54.49	51.45
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	51.43	51.22
EES19964	Sorghum	endoplasmic reticulum, plasma membrane, plastid	51.63	48.65
EES06493	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	49.8	46.56
KXG28804	Sorghum	plastid	49.39	46.36
EES19987	Sorghum	cytosol, endoplasmic reticulum, plastid	48.16	46.0
EER91722	Sorghum	peroxisome	50.0	45.79
EER88601	Sorghum	endoplasmic reticulum, plasma membrane, plastid	47.55	45.16
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	48.98	45.11
EER95458	Sorghum	mitochondrion	47.35	43.86
KXG39781	Sorghum	peroxisome	47.35	42.26
EER91618	Sorghum	plastid	45.1	42.18
EER95395	Sorghum	cytosol, peroxisome, plasma membrane	42.86	38.67
EES19986	Sorghum	cytosol	7.14	15.84

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	EntrezGene:8061525
InterPro:ACP_syn_III_C	UniProt:C5Z823	EnsemblPlants:EER89559	ProteinID:EER89559	ProteinID:EER89559.1	InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417
PANTHER:PTHR31561	PANTHER:PTHR31561:SF18	MetaCyc:PWY-4381	MetaCyc:PWY-5080	MetaCyc:PWY-5972	MetaCyc:PWY-6433
MetaCyc:PWY-6598	MetaCyc:PWY-7036	MetaCyc:PWY-7601	MetaCyc:PWY-7602	MetaCyc:PWY-7619	MetaCyc:PWY-7724
MetaCyc:PWY-7725	EnsemblPlantsGene:SORBI_3010G107400	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI0001A89A07
RefSeq:XP_002438192.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:10613918..10615882

Molecular Weight (calculated)

53582.1 Da

IEP (calculated)

8.527

GRAVY (calculated)

0.139

Length

490 amino acids

Sequence
(BLAST)

001: MSSPPLFGNG KGLKAVCRRV VDNILAVVTV PLTAAALVAM ARFGPEEQLA GQFREARPVH VFLAAFVPAA AATVYLMLRP RAVYLVDYAC FRTASNCRVP
101: FSTFLEHAKQ VPVLDERSIR FMTKLLERSG LGEETCLPPA HHYIPPYNYC TLDAARGEVD LVVFSALDDL FAKTGISAGA IDIVVVNCSL FCPTPSFVDM
201: IVHRYKLRSD VRSVHLSGMG CSAGLISVGL ARNLLQVAPK GTHALVVSTE TITPNYYVGS ERAMLLPNCL FRVGGAAALL SNSPDKARFR LKHVVRTLTG
301: AQDSAYTCVF QQEDDNGNVG INLNKDLMTI AGNALKANIT AMGPLVLPAS EQLLFALSFI ARKVISGKFK PYLPDFRTAF EHFCIHAGGR AVIDELQRSL
401: GLSDEQVEAS RMTLHRFGNT SSSSLWYELA YMEAKGCMRR GDRVWMIGFG SGFKCNSAAW ECIEPARTAE GPWATSIHRY PVHIPDVMKH

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.