Factsheet for Zm00001d045660_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037328_P001	Maize	cytosol	85.57	67.85
EER89559	Sorghum	mitochondrion, plasma membrane	92.78	55.1
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	84.54	53.48
Zm00001d051787_P001	Maize	mitochondrion	85.57	51.34
Os06t0262800-01	Rice	plasma membrane	86.6	51.01
TraesCS4A01G031500.1	Wheat	plasma membrane	84.54	50.93
TraesCS4B01G274700.1	Wheat	plastid	83.51	50.73
TraesCS4D01G273400.1	Wheat	endoplasmic reticulum	84.19	50.72
TraesCS4D01G008100.1	Wheat	plasma membrane	73.2	49.77
Zm00001d017941_P001	Maize	plasma membrane	83.85	49.49
TraesCS7A01G532300.1	Wheat	golgi	80.07	48.64
TraesCS7D01G519300.1	Wheat	golgi, plasma membrane	79.73	48.54
TraesCS7D01G519400.1	Wheat	plasma membrane	79.73	48.43
TraesCS7D01G035700.1	Wheat	plasma membrane	80.07	48.04
TraesCSU01G166100.1	Wheat	plasma membrane	81.1	47.97
TraesCS4A01G303900.1	Wheat	plasma membrane	80.76	47.76
TraesCS7B01G449300.1	Wheat	plasma membrane	78.35	47.7
HORVU7Hr1G006910.1	Barley	plasma membrane	78.35	46.82
TraesCS7B01G449000.1	Wheat	golgi	78.01	46.61
GSMUA_Achr3P07400_001	Banana	plasma membrane	58.76	43.96
GSMUA_Achr5P05870_001	Banana	plasma membrane	61.51	42.62
PGSC0003DMT400037757	Potato	plastid	66.67	42.08
KRH35956	Soybean	plasma membrane	71.13	41.73
KRG90814	Soybean	cytosol, golgi, plasma membrane	70.79	41.53
Zm00001d009354_P001	Maize	endoplasmic reticulum	68.73	41.15
Solyc02g063140.2.1	Tomato	golgi	70.1	41.13
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	70.1	41.13
Bra004034.1-P	Field mustard	plasma membrane	69.42	41.06
AT1G25450.1	Thale cress	plasma membrane	69.42	41.06
Solyc02g085870.2.1	Tomato	plasma membrane	69.76	40.93
Zm00001d048061_P001	Maize	golgi	69.42	40.89
CDY04232	Canola	plasma membrane	69.76	40.85
PGSC0003DMT400032993	Potato	plasma membrane	69.42	40.73
Zm00001d044579_P001	Maize	golgi	69.07	40.69
CDY07381	Canola	plasma membrane	69.42	40.64
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	69.07	40.52
VIT_14s0006g02990.t01	Wine grape	plasma membrane	68.38	40.45
AT1G68530.1	Thale cress	plasma membrane	69.07	40.44
Bra024749.1-P	Field mustard	plasma membrane	69.07	40.44
CDY42109	Canola	plasma membrane	69.07	40.44
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	68.73	40.32
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	68.38	40.28
Zm00001d044580_P001	Maize	mitochondrion	67.01	40.04
PGSC0003DMT400037714	Potato	plasma membrane	67.01	39.47
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	65.98	38.87
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	63.57	37.6
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	66.32	37.19
Zm00001d009608_P001	Maize	plasma membrane	62.54	36.04
Zm00001d039053_P001	Maize	plasma membrane	62.89	35.6
Zm00001d039094_P001	Maize	cytosol	60.14	34.38
Zm00001d014168_P001	Maize	peroxisome, plasma membrane, plastid	59.45	34.26
Zm00001d016438_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	60.82	34.24
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	58.08	34.14
Zm00001d048953_P001	Maize	mitochondrion, plastid	59.79	33.92
Zm00001d046444_P001	Maize	plasma membrane	59.11	33.4
Zm00001d027766_P001	Maize	mitochondrion	60.48	33.27
Zm00001d030343_P001	Maize	cytosol, peroxisome, plasma membrane	60.82	33.08
Zm00001d028406_P001	Maize	peroxisome	59.45	31.63
Zm00001d047931_P001	Maize	peroxisome	58.76	31.32
Zm00001d027904_P001	Maize	plastid	52.58	28.18
TraesCS7A01G532200.1	Wheat	cytosol	0.69	1.92

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A1D6NY61
InterPro:ACP_syn_III_C	ProteinID:AQL02937.1	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541
PANTHER:PTHR31561	PANTHER:PTHR31561:SF64	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0008434868	EnsemblPlantsGene:Zm00001d045660
EnsemblPlants:Zm00001d045660_P001	EnsemblPlants:Zm00001d045660_T001	:	:	:	:

Description

3-ketoacyl-CoA synthase

Coordinates

chr9:-:31624631..31625506

Molecular Weight (calculated)

31759.4 Da

IEP (calculated)

9.209

GRAVY (calculated)

0.013

Length

291 amino acids

Sequence
(BLAST)

001: MIINRYGLRS DVRSVHLSGM GCSAGLISVG LARNLLQVAP EGTHALVVST ETITPNYYVG SERAMLLPNC LFRIGGAAAL LSNSPAKARF RLKHVVRTLT
101: GAQDNAYTCV FQQEDDSGNV GINLNKDLMT IAGNALKANI TAMGPLVLPA SEQLLFALSF IARKVLSGKF KPYIPDFRTA FDHFCIHAGG RAVIDELQRS
201: LKLSDEQVEA SRMALHRFGN TSSSSLWYEL AYIEAKGRMR RGDRVWMIGF GSGFKCNSAA WECIAPAADA QGPWATSIHR YPVDIPDVLK H

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.