Factsheet for PGSC0003DMT400015633

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g083050.2.1	Tomato	plasma membrane	97.5	99.03
PGSC0003DMT400034973	Potato	plasma membrane	86.56	86.9
KRH34362	Soybean	plasma membrane	83.88	84.53
KRG92437	Soybean	plasma membrane	83.69	84.33
VIT_05s0020g04540.t01	Wine grape	plasma membrane	84.26	84.26
KRH69063	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	82.15	82.15
KRH31633	Soybean	endoplasmic reticulum, nucleus, plastid	80.42	81.04
PGSC0003DMT400067205	Potato	peroxisome	74.66	75.83
PGSC0003DMT400019029	Potato	plasma membrane	72.36	74.65
Os11t0591200-01	Rice	mitochondrion	61.42	74.07
PGSC0003DMT400002734	Potato	cytosol, peroxisome, plasma membrane	70.44	71.82
PGSC0003DMT400042065	Potato	cytosol	50.1	70.16
TraesCS6A01G073300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	66.22	67.91
PGSC0003DMT400014188	Potato	endoplasmic reticulum, golgi, plasma membrane	63.92	67.55
Zm00001d048953_P001	Maize	mitochondrion, plastid	66.41	67.45
TraesCS4D01G148300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	66.22	67.38
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	66.22	67.25
GSMUA_Achr3P15310_001	Banana	cytosol, nucleus, plastid	62.96	67.21
PGSC0003DMT400042071	Potato	plasma membrane	62.38	66.6
TraesCS4A01G164400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	65.07	66.21
KXG28804	Sorghum	plastid	66.03	65.9
PGSC0003DMT400009451	Potato	cytosol, peroxisome, plasma membrane	64.11	64.35
PGSC0003DMT400041959	Potato	endoplasmic reticulum, golgi, vacuole	53.55	63.55
TraesCS6D01G071600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	66.22	63.3
PGSC0003DMT400032993	Potato	plasma membrane	58.73	61.69
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	58.16	61.09
PGSC0003DMT400037757	Potato	plastid	53.93	60.95
PGSC0003DMT400041960	Potato	endoplasmic reticulum, golgi, vacuole	52.02	60.49
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	60.84	59.59
PGSC0003DMT400028047	Potato	plasma membrane	60.46	58.88
PGSC0003DMT400037714	Potato	plasma membrane	54.89	57.89
PGSC0003DMT400019063	Potato	cytosol, peroxisome, plasma membrane	54.89	52.96
PGSC0003DMT400049683	Potato	endoplasmic reticulum, golgi	41.46	48.54
PGSC0003DMT400051894	Potato	endoplasmic reticulum, plasma membrane	40.31	46.46

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:102584033	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1
InterPro:ACP_syn_III_C	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:M1A6B6
PFAM:PF08392	PFAM:PF08541	EnsemblPlantsGene:PGSC0003DMG400006101	PGSC:PGSC0003DMG400006101	EnsemblPlants:PGSC0003DMT400015633	PIRSF:PIRSF036417
PANTHER:PTHR31561	PANTHER:PTHR31561:SF25	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI0002959C8B
RefSeq:XP_006362163.1	SEG:seg	:	:	:	:

Description

Acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400006101]

Coordinates

chr9:-:55086801..55089656

Molecular Weight (calculated)

59010.4 Da

IEP (calculated)

8.894

GRAVY (calculated)

-0.026

Length

521 amino acids

Sequence
(BLAST)

001: MGDESTRRVS IEANHHDDQR INSNKLPNFL LSVRLKYVKL GYHYLISHAM YLFLIPILIA LFAHLSTITM EDMVQLWNQL KFNLVTVILC SALIVFLATL
101: YFMTRPRKVY LVDFSCYKPK PEVMCPKELF MERSKLAGIF TEENLAFQKK ILERSGLGQK TYFPEALLKL PPNPCMAEAR KEAEMVMFGA IDELLEKTGV
201: KAKDIGILVV NCSLFNPTPS LSAMIVNHYK LRGNILSYNL GGMGCSAGLI SIDLAKQMLQ VQPNSYALVV SMENITLNWY FGNNRSMLVS NCIFRMGGAA
301: ILLSNKSSDR RRSKYQLIHT VRTNKGADDK SYGCVFQEED DSKKIGVALS KDLMAVAGEA LKTNITTLGP IVLPMSEQLL FFATLVARKV LKMKIKPYIP
401: DFKLAFEHFC IHAGGRAVLD ELEKNLELSE WHMEPSRMTL YRFGNTSSSS LWYELAYTEA KGRIKKGDRT WQIAFGSGFK CNSAVWCALR TIDPAKEKNP
501: WMDEIDEFPV EVPRVVTIND S

Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)

001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI

Arabidopsis Description

KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.