Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0141g00090.t01 | Wine grape | cytosol | 50.66 | 53.38 |
| VIT_07s0141g00070.t01 | Wine grape | cytosol | 43.14 | 48.75 |
| PGSC0003DMT400042065 | Potato | cytosol | 39.16 | 47.58 |
| VIT_07s0141g00030.t01 | Wine grape | endoplasmic reticulum, extracellular | 46.46 | 47.4 |
| VIT_07s0141g00060.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 46.9 | 45.49 |
| PGSC0003DMT400049683 | Potato | endoplasmic reticulum, golgi | 43.36 | 44.04 |
| PGSC0003DMT400041959 | Potato | endoplasmic reticulum, golgi, vacuole | 40.27 | 41.46 |
| PGSC0003DMT400019029 | Potato | plasma membrane | 46.02 | 41.19 |
| PGSC0003DMT400037757 | Potato | plastid | 41.15 | 40.35 |
| PGSC0003DMT400015633 | Potato | plasma membrane | 46.46 | 40.31 |
| PGSC0003DMT400067205 | Potato | peroxisome | 45.35 | 39.96 |
| PGSC0003DMT400041960 | Potato | endoplasmic reticulum, golgi, vacuole | 39.38 | 39.73 |
| PGSC0003DMT400034973 | Potato | plasma membrane | 45.35 | 39.5 |
| PGSC0003DMT400002734 | Potato | cytosol, peroxisome, plasma membrane | 44.47 | 39.33 |
| PGSC0003DMT400042071 | Potato | plasma membrane | 42.26 | 39.14 |
| PGSC0003DMT400014188 | Potato | endoplasmic reticulum, golgi, plasma membrane | 42.26 | 38.74 |
| PGSC0003DMT400009451 | Potato | cytosol, peroxisome, plasma membrane | 43.36 | 37.76 |
| PGSC0003DMT400019063 | Potato | cytosol, peroxisome, plasma membrane | 43.58 | 36.48 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 39.82 | 36.29 |
| PGSC0003DMT400028047 | Potato | plasma membrane | 42.7 | 36.07 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 39.38 | 35.89 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 36.73 | 33.6 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | EntrezGene:107061579 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 |
| InterPro:ACP_syn_III_C | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | UniProt:M1BSE5 |
| PFAM:PF08392 | PFAM:PF08541 | EnsemblPlantsGene:PGSC0003DMG402020138 | PGSC:PGSC0003DMG402020138 | EnsemblPlants:PGSC0003DMT400051894 | PIRSF:PIRSF036417 |
| PANTHER:PTHR31561 | PANTHER:PTHR31561:SF10 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI000295DD1A |
| RefSeq:XP_015166551.1 | : | : | : | : | : |
Description
Beta-ketoacyl-coa synthase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG402020138]
Coordinates
chr6:+:58899896..58901447
Molecular Weight (calculated)
50748.9 Da
IEP (calculated)
8.067
GRAVY (calculated)
-0.009
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISQPILEF PTIMWLIFLV LIFIWGLRIN IIKKPSQKVF LIDFACYKPL ASQMCTKEKS LEIAKSMGNY SEEMLDKMRM AMDKVGLGDS TYLPKTLVTN
101: SPNLCLETSL KEAQDVMFGA LDIVFEKTKI DPKDVGILIV NCSVFDPVPS LSCMIVNHYK MNENVLSYNL GGMGCTAGLL AVRLANQLLQ VHESTYALIL
201: STENTSHSCY FGNDQSKIIP NCTFRVGGAA ILLSNHPSHR NSCKYELLHD VHCHGASSDR SYKSVFLEED DHGLIGVSIT KDLLVAATHA IETNLTSLAP
301: FILPLSEKLL FLKNFIMRRK KYVPNFTKID HFLPHVGGLP VLNQLQKKLG FSDLAMEASK ISLRRFGNTS SSSIWYILAY AEAKGRIKKG DKIWQMAFGS
401: GFKCSSVIWR TIRNVDTNDM KNPWKEESDV LIDLDLDINA PAHDYFQPHK ST
101: SPNLCLETSL KEAQDVMFGA LDIVFEKTKI DPKDVGILIV NCSVFDPVPS LSCMIVNHYK MNENVLSYNL GGMGCTAGLL AVRLANQLLQ VHESTYALIL
201: STENTSHSCY FGNDQSKIIP NCTFRVGGAA ILLSNHPSHR NSCKYELLHD VHCHGASSDR SYKSVFLEED DHGLIGVSIT KDLLVAATHA IETNLTSLAP
301: FILPLSEKLL FLKNFIMRRK KYVPNFTKID HFLPHVGGLP VLNQLQKKLG FSDLAMEASK ISLRRFGNTS SSSIWYILAY AEAKGRIKKG DKIWQMAFGS
401: GFKCSSVIWR TIRNVDTNDM KNPWKEESDV LIDLDLDINA PAHDYFQPHK ST
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.