Factsheet for VIT_07s0141g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0141g00030.t01	Wine grape	endoplasmic reticulum, extracellular	87.5	79.01
VIT_07s0141g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	91.5	78.54
VIT_07s0141g00090.t01	Wine grape	cytosol	69.75	65.03
PGSC0003DMT400049683	Potato	endoplasmic reticulum, golgi	54.25	48.76
Solyc09g065800.2.1	Tomato	endoplasmic reticulum, plasma membrane	53.75	47.67
Solyc09g065780.2.1	Tomato	endoplasmic reticulum, golgi	52.5	47.51
PGSC0003DMT400051894	Potato	endoplasmic reticulum, plasma membrane	48.75	43.14
VIT_05s0020g04540.t01	Wine grape	plasma membrane	56.0	42.99
VIT_04s0008g04710.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	52.0	40.7
VIT_12s0034g01840.t01	Wine grape	endoplasmic reticulum, golgi	45.75	39.87
VIT_10s0042g01230.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	44.0	39.29
VIT_14s0006g02990.t01	Wine grape	plasma membrane	47.75	38.82
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	47.25	38.1
VIT_18s0001g12550.t01	Wine grape	cytosol, peroxisome, plasma membrane	48.25	37.92
VIT_03s0063g02640.t01	Wine grape	plasma membrane	47.0	37.3
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	45.25	36.79
VIT_15s0048g02720.t01	Wine grape	cytosol, peroxisome, plasma membrane	48.5	36.6
VIT_11s0016g04700.t01	Wine grape	plastid	53.0	34.36
VIT_09s0070g00300.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.25	34.19
VIT_04s0008g02250.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	45.0	33.96

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
ProteinID:CCB44694	ProteinID:CCB44694.1	UniProt:F6GXK8	InterPro:FAE1_typ3_polyketide_synth	EMBL:FN594965	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF10	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI000210950A	ArrayExpress:VIT_07s0141g00070	EnsemblPlantsGene:VIT_07s0141g00070	EnsemblPlants:VIT_07s0141g00070.t01	RefSeq:XP_003632295
RefSeq:XP_003632295.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:40779..43815

Molecular Weight (calculated)

44574.1 Da

IEP (calculated)

8.263

GRAVY (calculated)

-0.041

Length

400 amino acids

Sequence
(BLAST)

001: MVIERLKLHG NFSDESLELM KKLMKTSGLG EATYLSEGLL REPLDMSTEA ARKEAEMVVF GAVDELLGKT GVKGEEIGIV VVHSSIFNTV PSLASMIVNR
101: YKLRENVLSY NMSGMGCSAG LLSIGLAKDL LKVHCNSYAL VVTTEIITQG CYMGKDPSKL IGNCIFRMGG AAVLLSNRLS DRNNSKYQLI HTVHTNTASS
201: DRSYNCIIQE KDHEGHVGIT ISKDLLVVAS EIIKSNVATL APLIFPASER LLYLINYLIR YFHVASIELY VPNVKCAVDH FFPHVGAKPI LDKVARNLRM
301: SEGQMEASRM TLYRFGNTSS SSVWYELAYA EAKGRIKRGD RVWQIAYGSG FKCSSAFWKA IRTVDREKMN PWSDVIDEFP VVDPHNTEIF PYAFELSKSK

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.