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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • endoplasmic reticulum 3
  • cytosol 1
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH10421 Soybean endoplasmic reticulum, plasma membrane 66.23 66.23
CDX68323 Canola endoplasmic reticulum, golgi 61.0 62.08
Bra007966.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 60.13 61.47
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 59.7 61.02
CDY37951 Canola endoplasmic reticulum, plasma membrane 59.26 60.58
AT1G71160.1 Thale cress endoplasmic reticulum, plasma membrane 59.48 59.35
VIT_10s0042g01230.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 52.07 53.35
VIT_01s0011g03490.t01 Wine grape cytosol, golgi, plasma membrane 50.76 46.98
VIT_14s0006g02990.t01 Wine grape plasma membrane 50.33 46.95
VIT_19s0093g00440.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 49.46 46.14
VIT_07s0141g00070.t01 Wine grape cytosol 39.87 45.75
VIT_07s0141g00090.t01 Wine grape cytosol 42.48 45.45
VIT_03s0063g02640.t01 Wine grape plasma membrane 48.8 44.44
VIT_04s0008g04710.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 49.46 44.42
VIT_05s0020g04540.t01 Wine grape plasma membrane 50.33 44.34
VIT_07s0141g00030.t01 Wine grape endoplasmic reticulum, extracellular 42.27 43.79
VIT_18s0001g12550.t01 Wine grape cytosol, peroxisome, plasma membrane 48.15 43.42
VIT_07s0141g00060.t01 Wine grape endoplasmic reticulum, plasma membrane 41.18 40.56
VIT_15s0048g02720.t01 Wine grape cytosol, peroxisome, plasma membrane 46.41 40.19
VIT_09s0070g00300.t01 Wine grape cytosol, peroxisome, plasma membrane 41.83 37.94
Bra003934.1-P Field mustard plasma membrane 61.44 37.75
VIT_04s0008g02250.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 42.48 36.79
VIT_11s0016g04700.t01 Wine grape plastid 47.71 35.49
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199EntrezGene:100244668wikigene:100244668InterPro:3-ktacl-CoA_synGene3D:3.40.47.10
MapMan:5.1.6.1.1InterPro:ACP_syn_III_CEMBL:AM474400ProteinID:CAN66110ProteinID:CAN66110.1ProteinID:CCB48686
ProteinID:CCB48686.1UniProt:F6H8X6InterPro:FAE1_typ3_polyketide_synthEMBL:FN595497GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747
InterPro:IPR016039EntrezGene:LOC100244668wikigene:LOC100244668PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417
PANTHER:PTHR31561PANTHER:PTHR31561:SF20SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI00015CAB11
ArrayExpress:VIT_12s0034g01840EnsemblPlantsGene:VIT_12s0034g01840EnsemblPlants:VIT_12s0034g01840.t01RefSeq:XP_003633377RefSeq:XP_003633377.1RefSeq:XP_010657694.1
SEG:seg:::::
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6H8X6]
Coordinates
chr12:-:18055663..18057048
Molecular Weight (calculated)
51165.2 Da
IEP (calculated)
9.067
GRAVY (calculated)
0.036
Length
459 amino acids
Sequence
(BLAST)
001: MVTGLFRCIS LTNSFIITEA TKSLTPLHLL AALALILVVF LLYSRFSSVY LIDFSCYRAP NHLRTPTSHV IEHLELYGNF SGENVNFQAK LSERSGIGGE
101: AFIPVGGHEI PPDTSLKRAR EEIEMVLFTV VKDLLSKHKI NSKQIDILIS NCSLVCPTPS ITAMIINKFG FRSNVKSISI SGMGCSAGIL SISLAKDLLK
201: VHKNSLALVL SMEAVTPNGY MGKNKSMLVA NTLFRAGGVA ILLSNRKQDK KIAKYKLQHL VRTHMGSDDL SYQSVFQETD EDGFVGVSLS RALLRIAGNA
301: LRTNISEIGP LVLPYSEQIR YGWSLFCQKV WAPARWKEIH TPNFKKAFEH FCIHAGGRAV IDAVENTLRL CNEDGEASRM TLYRFGNTSS SSVWYELCYL
401: EAKGRIKKGD RVWQIAFGSG FKCNSVVWKC ISEVDPKVEN AWSDRIHLYP VEVPHVIDH
Best Arabidopsis Sequence Match ( AT1G71160.1 )
(BLAST)
001: MESSFHFINE ALLITQTFIT FHQFLVASAC VLIAVFGYYF FKPRCIIYLI DFSCYQPPDF LRAPVSNFIE HLTISGVFDQ ESLDLQQKIL ERSGISDDAS
101: VPATVHEIPP NASISAAREE THEILFAIVQ DLFSKHEIDP KSIDILVSNC SLFCPSPSIT SMIINKFGMR SDIKSFSLSG MGCSAGILSV NLVKDLMKIH
201: GDSLALVLSM EAVSPNGYRG KCKSMLIANT IFRMGGAAIL LSNRKQDSHK AKYKLQHIIR THVGSDTESY ESVMQQVDEE GKVGVALSKQ LVRVASKALK
301: INVVQLGPRV LPYSEQLKYI ISFIQRKWGM HKEIYTPNFK KAFEHFCIHA GGRAIIEGVE KHLKLDKEDV EASRSTLYRY GNTSSSSLWY ELQYLEAKGR
401: MKMGDKVWQI GFGSGFKANS AVWKCISEID SRGRNAWSDR IHLYPVCGDT SSALKTELLS
Arabidopsis Description
KCS73-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W4M1]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.