Factsheet for Solyc09g065780.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049683	Potato	endoplasmic reticulum, golgi	92.53	91.91
Solyc09g065800.2.1	Tomato	endoplasmic reticulum, plasma membrane	79.19	77.61
VIT_07s0141g00070.t01	Wine grape	cytosol	47.51	52.5
VIT_07s0141g00030.t01	Wine grape	endoplasmic reticulum, extracellular	50.45	50.34
VIT_07s0141g00090.t01	Wine grape	cytosol	48.42	49.88
VIT_07s0141g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	48.42	45.92
Solyc08g067410.1.1	Tomato	plasma membrane	46.61	40.79
Solyc09g083050.2.1	Tomato	plasma membrane	46.83	40.35
Solyc06g053870.2.1	Tomato	mitochondrion	43.67	39.71
Solyc03g005320.2.1	Tomato	plasma membrane	46.61	39.69
Solyc06g065560.1.1	Tomato	nucleus	45.25	38.99
Solyc12g006820.1.1	Tomato	plasma membrane	43.89	38.8
Solyc02g063140.2.1	Tomato	golgi	42.76	38.1
Solyc02g085870.2.1	Tomato	plasma membrane	42.53	37.9
Solyc05g013220.2.1	Tomato	endoplasmic reticulum, golgi, plastid	42.08	37.73
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	41.86	37.45
Solyc06g053900.2.1	Tomato	cytosol, plasma membrane, plastid	41.86	37.37
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	43.44	36.99
Solyc10g009240.2.1	Tomato	peroxisome	43.89	36.67
Solyc04g080450.1.1	Tomato	golgi, peroxisome, plasma membrane	42.76	36.56
Solyc08g067260.2.1	Tomato	cytosol, peroxisome, plasma membrane	34.84	30.43

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:K4CUK4	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF10	SUPFAM:SSF53901	EnsemblPlantsGene:Solyc09g065780.2
EnsemblPlants:Solyc09g065780.2.1	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000276C934	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4CUK4]

Coordinates

chr9:-:64058148..64059751

Molecular Weight (calculated)

50306.7 Da

IEP (calculated)

7.987

GRAVY (calculated)

-0.131

Length

442 amino acids

Sequence
(BLAST)

001: MELILTYPKL FFITFTLVIL FFYRKNSKRR VFLVDFSCYK PPKNQQVDRQ TFVNKSTKTL CYNKDSLEFM DKMLERSGLG DKTYLSKGLF KEPIDMSAEA
101: AKEEVEMAIF GVIDELLLKT EVQCNDIDIL ITVFGVYNII PSVSSVIVKR YNLRHDIRTY NITGMGCTAG LVALGLVQNL FKVHDNSCAL VVTSESTTAN
201: VYKGNDRSKL LTNCIFRVGA VALLLSNKPS DLNKSKYELI HTVRSQTSDD DRSYNCIFME EDVEGHRGIT INKDLLYAAM KTIRLNISTV APLVLPLSEK
301: FRYLVNLFST RSNFYSPDFS KSIDHFFPHV GGKPVLDDLQ KKLGFSDEQM EASRMTLYRI GNPSSGSIWY EVAYAEAKGR VEKGDALWQI AFGSGFKCNS
401: VIWKAIRSVH RDEMNPWRDE IHEFPVNVSD IEVVPDLFVA SK

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.