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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 87.44 78.34
CDY47458 Canola cytosol 8.53 72.0
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 74.41 67.97
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 66.59 67.06
Zm00001d009608_P001 Maize plasma membrane 79.86 66.73
Zm00001d039053_P001 Maize plasma membrane 80.09 65.76
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 80.81 65.58
Os05t0568000-02 Rice plasma membrane 79.86 65.56
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 78.91 64.41
TraesCS1A01G406200.1 Wheat plasma membrane 79.38 64.18
VIT_18s0001g12550.t01 Wine grape cytosol, peroxisome, plasma membrane 77.25 64.05
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 79.62 64.0
TraesCS1D01G414600.1 Wheat peroxisome 79.62 64.0
PGSC0003DMT400009451 Potato cytosol, peroxisome, plasma membrane 78.44 63.78
CDX81929 Canola plasma membrane 75.36 62.35
Bra031081.1-P Field mustard plasma membrane 74.88 61.84
KRH05829 Soybean cytosol, peroxisome, plasma membrane 75.12 61.79
CDY21665 Canola plasma membrane 74.64 61.76
AT1G19440.1 Thale cress golgi, peroxisome, plasma membrane 75.36 61.63
KRH15203 Soybean plasma membrane 74.41 61.57
CDX89699 Canola cytosol 47.16 61.23
Bra025738.1-P Field mustard plasma membrane 73.22 61.07
KRH51526 Soybean plasma membrane 63.74 60.72
CDX71278 Canola cytosol, peroxisome, plasma membrane 72.75 60.55
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 73.22 60.35
CDY46211 Canola cytosol, peroxisome, plasma membrane 72.27 60.16
Bra001974.1-P Field mustard cytosol, peroxisome, plasma membrane 72.04 59.96
CDY29431 Canola plasma membrane 68.72 59.92
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 64.45 59.65
CDY26665 Canola cytosol, peroxisome, plasma membrane 69.91 59.6
CDY10355 Canola cytosol 35.78 58.53
GSMUA_Achr2P21590_001 Banana golgi, peroxisome, plastid 52.37 57.25
HORVU1Hr1G089710.3 Barley plastid 79.62 57.05
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 52.13 56.56
CDX76286 Canola golgi 63.27 56.33
CDY46243 Canola golgi 63.03 56.12
AT4G34510.1 Thale cress plasma membrane 64.45 55.85
GSMUA_Achr3P02180_001 Banana plasma membrane 46.68 55.81
Bra034634.1-P Field mustard golgi 62.56 55.7
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi, plasma membrane 57.82 55.08
GSMUA_Achr3P07400_001 Banana plasma membrane 50.0 54.24
GSMUA_Achr10P... Banana plasma membrane 55.45 54.17
GSMUA_AchrUn_... Banana peroxisome 50.47 53.65
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 56.4 53.48
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 59.24 52.97
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 54.03 52.9
GSMUA_Achr7P08410_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 48.1 51.92
Bra017641.1-P Field mustard golgi 58.53 51.24
Bra036405.1-P Field mustard cytosol, plasma membrane, plastid 55.92 51.19
GSMUA_Achr8P30930_001 Banana endoplasmic reticulum, extracellular 46.68 51.04
Bra013081.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 58.77 50.92
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 57.11 50.52
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 55.45 50.43
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.21 50.22
GSMUA_Achr3P02010_001 Banana golgi, peroxisome, plastid 52.84 50.0
AT2G15090.1 Thale cress golgi 56.87 49.9
CDY17465 Canola plasma membrane 56.16 49.89
GSMUA_Achr5P05870_001 Banana plasma membrane 49.53 49.76
CDX72475 Canola endoplasmic reticulum, golgi 49.53 49.41
GSMUA_Achr1P02540_001 Banana cytosol 49.53 49.29
AT4G34250.1 Thale cress endoplasmic reticulum, golgi 57.35 49.09
Bra034635.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 58.77 49.01
CDY49290 Canola endoplasmic reticulum, golgi 49.05 48.94
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 58.53 48.81
AT4G34520.1 Thale cress golgi 58.29 48.62
GSMUA_Achr3P15310_001 Banana cytosol, nucleus, plastid 56.16 48.57
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 50.95 48.21
GSMUA_Achr6P11690_001 Banana cytosol, peroxisome, plastid 55.45 48.05
GSMUA_Achr6P23320_001 Banana endoplasmic reticulum, golgi, vacuole 44.79 47.37
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSMUA_Achr6G27270_001EnsemblPlants:GSMUA_Achr6P27270_001EnsemblPlants:GSMUA_Achr6T27270_001
InterPro:IPR016039UniProt:M0TAM2PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF65SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0002954F14SEG:seg
Description
3-ketoacyl-CoA synthase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr6G27270_001]
Coordinates
chr6:-:27821978..27823540
Molecular Weight (calculated)
47546.0 Da
IEP (calculated)
9.628
GRAVY (calculated)
-0.008
Length
422 amino acids
Sequence
(BLAST)
001: MEGGGAAAAV EQAPVLPRRE SRRLPDFLQS VNIKYVKLGY HYLITHLLAL LLIPLMVVIL LEAAQTEPDD LRQLWLHLQY NLVSVLVCSA FLVFGATVYI
101: MTRPRPVYLF NESSLEFQRR ILERSGLGQE TCLPSALHYI PPRPSMAYAR EEAEDVMFGA LDTLFRNTGV KPKDVGILVV NCSLFNPTPS LSAMIVNRYK
201: LRGNIKSFNL GGMGCSAGVI SIDLARDLLQ VHRSTYAVVV STENITQNWY FGNRKSMLIP NCLFRVGAAA VLLSNRTVDR RRARYKLVHV VRTHRGADDK
301: AFRCINITTL GPLVLPISEQ LLFFATLLRP EHVEASRMTL HRFGNTSSSS IWYELAYTEA KGRMRKGHRV WQIAFGSGFK CNSAVWQALR SVKPSPDGPW
401: EDCIHRYPVE IVDGFPQPPQ EQ
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.