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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10355 Canola cytosol 58.47 97.67
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 94.66 91.69
CDY47458 Canola cytosol 9.51 82.0
CDX89699 Canola cytosol 48.26 64.0
CDY17465 Canola plasma membrane 68.91 62.53
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 71.93 61.26
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 56.38 58.0
CDX76286 Canola golgi 63.57 57.81
KRH51526 Soybean plasma membrane 59.16 57.56
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 61.95 57.54
CDY46243 Canola golgi 63.11 57.38
CDX71278 Canola cytosol, peroxisome, plasma membrane 66.82 56.8
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 61.02 56.68
CDY46211 Canola cytosol, peroxisome, plasma membrane 66.59 56.61
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 62.41 56.39
CDY63070 Canola cytosol 48.03 56.25
CDX72475 Canola endoplasmic reticulum, golgi 54.99 56.03
CDY49290 Canola endoplasmic reticulum, golgi 54.99 56.03
VIT_03s0063g02640.t01 Wine grape plasma membrane 64.73 55.36
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 52.9 54.03
CDX81929 Canola plasma membrane 63.57 53.73
CDY21665 Canola plasma membrane 63.34 53.53
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 48.26 53.47
CDY15199 Canola cytosol 42.0 53.24
CDY26665 Canola cytosol, peroxisome, plasma membrane 61.02 53.13
CDX94721 Canola cytosol 48.72 53.03
CDY29431 Canola plasma membrane 59.4 52.89
Zm00001d009608_P001 Maize plasma membrane 61.25 52.28
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 57.08 52.23
Os05t0568000-02 Rice plasma membrane 62.18 52.14
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 55.45 51.73
Zm00001d039053_P001 Maize plasma membrane 61.48 51.56
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 61.48 50.96
TraesCS1A01G406200.1 Wheat plasma membrane 60.32 49.81
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 54.52 49.79
TraesCS1D01G414600.1 Wheat peroxisome 60.56 49.71
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 60.56 49.71
CDX70186 Canola plastid 57.31 48.15
CDY07381 Canola plasma membrane 54.99 47.69
CDX98800 Canola plastid 57.31 47.68
CDY04232 Canola plasma membrane 54.52 47.28
CDY42109 Canola plasma membrane 54.29 47.08
CDX89834 Canola plasma membrane 55.45 45.87
CDY14892 Canola endoplasmic reticulum, golgi, plastid 55.92 45.82
CDX96912 Canola endoplasmic reticulum, golgi, plastid 55.68 45.54
CDY18212 Canola plasma membrane 54.99 44.8
HORVU1Hr1G089710.3 Barley plastid 60.56 44.31
CDY37475 Canola plasma membrane 48.26 43.51
CDY32443 Canola plasma membrane 48.03 43.31
CDX90012 Canola cytosol 51.51 41.97
CDY05644 Canola plasma membrane, plastid, vacuole 43.16 40.7
CDY33931 Canola plastid 43.16 40.7
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 50.12 40.6
CDY37951 Canola endoplasmic reticulum, plasma membrane 42.23 40.53
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 42.0 40.31
CDY49219 Canola endoplasmic reticulum, plasma membrane 42.23 40.18
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 50.81 39.96
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 50.58 39.71
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 50.12 39.49
CDX68323 Canola endoplasmic reticulum, golgi 41.3 39.47
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.58 34.22
CDY41551 Canola golgi 49.88 34.18
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078DKK3InterPro:ACP_syn_III_CEnsemblPlants:CDX89700ProteinID:CDX89700ProteinID:CDX89700.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00150105001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF23MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EE3012:
Description
BnaC03g46140D
Coordinates
chrLK031860:+:920699..922090
Molecular Weight (calculated)
47576.6 Da
IEP (calculated)
9.656
GRAVY (calculated)
-0.054
Length
431 amino acids
Sequence
(BLAST)
001: MANVKLIYHY LITHFFKLCL LPLIALVATK ASSLTLNILF AIFTFGSTVY FLTRPRPVYL VDYSCHLPPA HQKININKNL EINPFLSSLG ETSSLDFFYR
101: VLERSGLGDE TYIPNALHSV PPLQTMAAAR EETEQVIFDA IDNLLTNTKV NTREIGIIIL NSSTFNPTPS LSAMVVNKYK LRSNIKSINL GGMGCSAGVI
201: AIDLAKDLLQ VHKNTYALVV STENISRNAY AGDNKSMIVA NCLFRLGGAA ILLSNKPGDR RRSKYKLLHT VRTHTGADDK SFRCVQQEDD DKGKTGISLT
301: KDITSVAGRT ITKNIATLGP LRAIDHFCIH AGGRALIDEL GKRLGLSPVD VEPSRSTLHR FGNTSSSSIW YELAYTEAKG RMKKGDKAWQ IALGSGFKCN
401: SAVWVALRNV NPSVNSPWEH CIDKYPVKLD L
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.