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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46243 Canola golgi 98.52 98.52
Bra034634.1-P Field mustard golgi 97.89 97.89
CDX89699 Canola cytosol 57.17 83.38
CDY47458 Canola cytosol 8.65 82.0
AT4G34510.1 Thale cress plasma membrane 83.12 80.9
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 62.03 75.58
CDX71278 Canola cytosol, peroxisome, plasma membrane 79.54 74.36
KRH51526 Soybean plasma membrane 69.2 74.04
CDY10355 Canola cytosol 40.3 74.03
CDY46211 Canola cytosol, peroxisome, plasma membrane 78.9 73.77
VIT_03s0063g02640.t01 Wine grape plasma membrane 73.84 69.44
CDX81929 Canola plasma membrane 73.21 68.04
CDY21665 Canola plasma membrane 73.0 67.84
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 65.19 66.88
CDY29431 Canola plasma membrane 68.14 66.74
CDX94721 Canola cytosol 55.7 66.67
CDY15199 Canola cytosol 47.68 66.47
CDY26665 Canola cytosol, peroxisome, plasma membrane 68.99 66.06
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 64.98 65.25
Os05t0568000-02 Rice plasma membrane 70.46 64.98
Zm00001d039053_P001 Maize plasma membrane 70.25 64.79
Zm00001d009608_P001 Maize plasma membrane 68.99 64.75
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 70.46 64.23
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 63.5 63.91
CDY63070 Canola cytosol 49.37 63.59
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 57.81 63.57
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 56.33 63.27
TraesCS1A01G406200.1 Wheat plasma membrane 68.78 62.45
TraesCS1D01G414600.1 Wheat peroxisome 68.99 62.29
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 68.99 62.29
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 54.85 62.05
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 58.23 62.02
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 59.28 60.56
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 59.07 60.34
CDX72475 Canola endoplasmic reticulum, golgi 53.38 59.81
CDY49290 Canola endoplasmic reticulum, golgi 52.95 59.34
CDY17465 Canola plasma membrane 58.86 58.74
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 59.07 58.7
CDX70186 Canola plastid 63.29 58.48
CDX98800 Canola plastid 63.29 57.92
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 61.39 57.51
CDY14892 Canola endoplasmic reticulum, golgi, plastid 63.71 57.41
CDX96912 Canola endoplasmic reticulum, golgi, plastid 63.5 57.12
CDY07381 Canola plasma membrane 59.49 56.74
CDX89834 Canola plasma membrane 62.24 56.62
CDY04232 Canola plasma membrane 59.07 56.34
CDY42109 Canola plasma membrane 58.44 55.73
CDY18212 Canola plasma membrane 62.03 55.58
HORVU1Hr1G089710.3 Barley plastid 68.99 55.52
CDX90012 Canola cytosol 56.12 50.28
CDY32443 Canola plasma membrane 50.42 50.0
CDY37475 Canola plasma membrane 50.21 49.79
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 55.49 49.44
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 56.33 48.72
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 55.49 48.08
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 55.27 47.72
CDY37951 Canola endoplasmic reticulum, plasma membrane 43.25 45.66
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 42.62 44.99
CDY49219 Canola endoplasmic reticulum, plasma membrane 42.62 44.59
CDX68323 Canola endoplasmic reticulum, golgi 41.98 44.12
CDY05644 Canola plasma membrane, plastid, vacuole 41.35 42.89
CDY33931 Canola plastid 41.14 42.67
CDY41551 Canola golgi 49.79 37.52
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.0 37.21
CDY49218 Canola plasma membrane 0.21 0.35
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078CGF2InterPro:ACP_syn_III_CEnsemblPlants:CDX76286ProteinID:CDX76286ProteinID:CDX76286.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00126651001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF23MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EED74ASEG:seg
Description
BnaA08g11140D
Coordinates
chrLK031807:+:145556..146980
Molecular Weight (calculated)
53784.8 Da
IEP (calculated)
9.674
GRAVY (calculated)
-0.016
Length
474 amino acids
Sequence
(BLAST)
001: MDDNVQIRKN VKLCYHYLIT HFLKLLLVAS LTVLVMNISR LSLNHLAFIF LVAVLGTTLF FMSRPRSVYL VDYSCYLPPS SLQFTYEKFM KHSILTNIFN
101: ESSLEFQSKI LKRSGLGDET YLPEAIHYVP PRPTMAAARE EAELVVFGAL DSLFENTKVN LKEISVLVVN CSLFNPTPSL SAMIVNKYKL RENVKSFNLG
201: GMGCSAGVIA VDLANDMLQL YRNTYALVVS TENITQNWYF GNKKAMLIPN CLFRIGGSAV LLSNKSCDRK RSKYKLVHTV RTHKGSDEKA FNCVYQEQDE
301: TLKTGVSLSK DLMSIAGEAL KTNITTLGPL VLPMSEQILF FATYLVNKLF NAKKKMKPYM PDFKLAFDHF CIHAGGRAVI DELEKNLRLL PKHVEASRMT
401: LHRFGNTSSS SIWYELAYTE AKGRMRKGNR VWQIAFGSGF KCNSAVWVAL RDVEPSVKNP WEHCIHRYPV KIDL
Best Arabidopsis Sequence Match ( AT4G34510.1 )
(BLAST)
001: MDANGGPVQI RTQNYVKLGY HYLITHFFKL MFLPLMAVLF MNVSLLSLNH LQLYYNSTGF IFVITLAIVG SIVFFMSRPR SIYLLDYSCY LPPSSQKVSY
101: QKFMNNSSLI QDFSETSLEF QRKILIRSGL GEETYLPDSI HSIPPRPTMA AAREEAEQVI FGALDNLFEN TKINPREIGV LVVNCSLFNP TPSLSAMIVN
201: KYKLRGNIKS FNLGGMGCSA GVIAVDLASD MLQIHRNTFA LVVSTENITQ NWYFGNKKAM LIPNCLFRVG GSAVLLSNKP LDRKRSKYKL VHTVRTHKGS
301: DENAFNCVYQ EQDECLKTGV SLSKDLMAIA GEALKTNITS LGPLVLPISE QILFFATFVA KRLFNDKKKK PYIPDFKLAL DHFCIHAGGR AVIDELEKSL
401: KLSPKHVEAS RMTLHRFGNT SSSSIWYELA YTEAKGRMRK GNRVWQIAFG SGFKCNSAVW VALRNVEPSV NNPWEHCIHR YPVKIDL
Arabidopsis Description
KCS173-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UZI2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.