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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 99.41 99.41
AT4G34520.1 Thale cress golgi 85.57 85.57
Bra013081.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 67.79 70.43
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 60.47 67.11
KRH51526 Soybean plasma membrane 57.31 65.46
Bra001974.1-P Field mustard cytosol, peroxisome, plasma membrane 63.64 63.51
VIT_03s0063g02640.t01 Wine grape plasma membrane 62.45 62.7
Bra025738.1-P Field mustard plasma membrane 62.45 62.45
Bra036405.1-P Field mustard cytosol, plasma membrane, plastid 56.72 62.26
Bra017641.1-P Field mustard golgi 58.89 61.83
Bra034634.1-P Field mustard golgi 57.31 61.18
Bra031081.1-P Field mustard plasma membrane 60.87 60.27
Zm00001d009608_P001 Maize plasma membrane 59.49 59.6
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 49.01 58.77
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 48.62 58.71
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 52.96 58.01
Zm00001d039053_P001 Maize plasma membrane 58.89 57.98
Os05t0568000-02 Rice plasma membrane 58.7 57.78
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 58.89 57.31
TraesCS1A01G406200.1 Wheat plasma membrane 58.5 56.7
TraesCS1D01G414600.1 Wheat peroxisome 58.7 56.57
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 58.7 56.57
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 52.17 56.05
Bra009413.1-P Field mustard cytosol, golgi, plasma membrane 54.74 53.58
Bra004034.1-P Field mustard plasma membrane 50.79 52.24
Bra024749.1-P Field mustard plasma membrane 50.0 50.91
Bra033694.1-P Field mustard golgi, peroxisome, plastid 52.57 50.57
HORVU1Hr1G089710.3 Barley plastid 58.7 50.42
Bra035992.1-P Field mustard plasma membrane 52.37 50.38
Bra015296.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 52.37 50.09
Bra032621.1-P Field mustard plasma membrane 45.26 46.64
Bra007966.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 39.72 44.77
Bra020664.1-P Field mustard plastid 38.34 43.79
Bra034298.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 44.07 42.48
Bra007766.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 45.45 42.05
Bra003934.1-P Field mustard plasma membrane 39.13 26.51
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
EnsemblPlantsGene:Bra034635EnsemblPlants:Bra034635.1EnsemblPlants:Bra034635.1-PInterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009922GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746
GO:GO:0016747InterPro:IPR016039UniProt:M4F0P0PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417
PANTHER:PTHR31561PANTHER:PTHR31561:SF23SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI000254639C
Description
AT4G34520 (E=1e-253) FAE1, KCS18 | KCS18; acyltransferase/ fatty acid elongase
Coordinates
chrA08:-:12365939..12367459
Molecular Weight (calculated)
56373.0 Da
IEP (calculated)
9.524
GRAVY (calculated)
-0.117
Length
506 amino acids
Sequence
(BLAST)
001: MTSVNVKLVY HYVITNLFNL CFFPLTAIVA GKAYRLTIDD LHHLYYSYLQ HNLITIAPLF AFTVFGSVLY IATRPKPVYL VEYSCYLPPT HCRSSISKVM
101: DIFYQVRKAD PSRNGTCDDS SWLDFLRKIQ ERSGLGDETH GPEGLLQVPP RKTFAAAREE TEQVIIGALE NLFKNTNVNP KDIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNVRSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITYNIYAG DNRSMMVSNC LFRVGGAAIL LSNKPGDRRR SKYELVHTVR
301: THTGADDKSF RCVQQGDDEN GKTGVSLSKD ITDVAGRTVK KNIATLGPLI LPLSEKLLFF VTFMGKKLFK DKIKHYYVPD FKLAIDHFCI HAGGRAVIDV
401: LEKNLALAPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKVW QIALGSGFKC NSAVWVALNN VKASTNSPWE HCIDRYPVKI DSDSGKSETR
501: VQNGRS
Best Arabidopsis Sequence Match ( AT4G34520.1 )
(BLAST)
001: MTSVNVKLLY RYVLTNFFNL CLFPLTAFLA GKASRLTIND LHNFLSYLQH NLITVTLLFA FTVFGLVLYI VTRPNPVYLV DYSCYLPPPH LKVSVSKVMD
101: IFYQIRKADT SSRNVACDDP SSLDFLRKIQ ERSGLGDETY SPEGLIHVPP RKTFAASREE TEKVIIGALE NLFENTKVNP REIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNIKSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITQGIYAG ENRSMMVSNC LFRVGGAAIL LSNKSGDRRR SKYKLVHTVR
301: THTGADDKSF RCVQQEDDES GKIGVCLSKD ITNVAGTTLT KNIATLGPLI LPLSEKFLFF ATFVAKKLLK DKIKHYYVPD FKLAVDHFCI HAGGRAVIDE
401: LEKNLGLSPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKAW QIALGSGFKC NSAVWVALRN VKASANSPWQ HCIDRYPVKI DSDLSKSKTH
501: VQNGRS
Arabidopsis Description
FAE13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UUK5]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.