Factsheet for Bra017641.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
mitochondrion 1
golgi 5
cytosol 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49290	Canola	endoplasmic reticulum, golgi	84.85	96.69
CDX72475	Canola	endoplasmic reticulum, golgi	83.4	95.04
AT4G34250.1	Thale cress	endoplasmic reticulum, golgi	81.33	79.51
Bra036405.1-P	Field mustard	cytosol, plasma membrane, plastid	73.03	76.36
KRH51526	Soybean	plasma membrane	58.51	63.66
Bra037304.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	59.34	62.72
Bra013081.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	62.24	61.6
Bra034634.1-P	Field mustard	golgi	59.54	60.55
VIT_03s0063g02640.t01	Wine grape	plasma membrane	62.86	60.12
Bra025738.1-P	Field mustard	plasma membrane	62.03	59.09
Bra034635.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	61.83	58.89
GSMUA_Achr6P27270_001	Banana	cytosol, peroxisome, plasma membrane	51.24	58.53
Zm00001d009608_P001	Maize	plasma membrane	60.79	58.02
Bra001974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.0	57.99
GSMUA_Achr2P08980_001	Banana	golgi, peroxisome, plasma membrane	55.39	57.79
Zm00001d039053_P001	Maize	plasma membrane	61.62	57.78
Os05t0568000-02	Rice	plasma membrane	61.41	57.59
Bra031081.1-P	Field mustard	plasma membrane	60.79	57.34
EES19964	Sorghum	endoplasmic reticulum, plasma membrane, plastid	61.0	56.54
GSMUA_Achr9P06980_001	Banana	cytosol, golgi, peroxisome	55.19	56.48
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	60.17	55.24
TraesCS1A01G406200.1	Wheat	plasma membrane	59.75	55.17
TraesCS1D01G414600.1	Wheat	peroxisome	59.96	55.05
GSMUA_Achr5P09090_001	Banana	golgi, peroxisome, plasma membrane	47.51	54.65
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	56.85	53.0
Bra033694.1-P	Field mustard	golgi, peroxisome, plastid	57.47	52.66
Bra035992.1-P	Field mustard	plasma membrane	57.26	52.47
Bra004034.1-P	Field mustard	plasma membrane	52.49	51.42
Bra015296.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	55.39	50.47
Bra024749.1-P	Field mustard	plasma membrane	51.24	49.7
HORVU1Hr1G089710.3	Barley	plastid	60.17	49.24
Bra007966.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	43.15	46.33
Bra032621.1-P	Field mustard	plasma membrane	46.89	46.03
Bra020664.1-P	Field mustard	plastid	39.42	42.89
Bra034298.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	46.06	42.29
Bra007766.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	47.93	42.23
Bra003934.1-P	Field mustard	plasma membrane	42.53	27.44

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
EnsemblPlantsGene:Bra017641	EnsemblPlants:Bra017641.1	EnsemblPlants:Bra017641.1-P	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009416	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:M4DMA9	PFAM:PF08392	PFAM:PF08541
PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF23	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like
UniParc:UPI00025411FF	:	:	:	:	:

Description

AT4G34250 (E=3e-230) KCS16 | KCS16 (3-KETOACYL-COA SYNTHASE 16); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups

Coordinates

chrA03:+:29491187..29492635

Molecular Weight (calculated)

53971.7 Da

IEP (calculated)

9.421

GRAVY (calculated)

-0.006

Length

482 amino acids

Sequence
(BLAST)

001: MVFNYLTTHR LKLYFLPLSV AIAMQASRVS SQDLHSFHLS LQKNFTSLTI FSFSLILGWT LYIMNRPKPV YLVDFSCYLP PSHLKASVEK IMHHVRVVRE
101: SGKWAKSGEN DYLMDFVTKI LERSGLGQET YVPEGLHCLP IEQSMVGSRK ETQEVILGAV DTLLRNTGIS PSDIGILVVN SSTFNPTPSL ATIIVNKYKL
201: RENIKSFNLG GMGCSAGVIA IDVAKSLLQV HRNTYALVVS TENITQNLYV GNNKSMLVTN CLFRVGGAAV LLSNISKDRK LAKYKLVHTV RVHTGSDDRS
301: YGCATQEEDE DGVVGVTLSK DLPMVAARTL KINIATLGPL VLPISEKLLF FVTFLRKKFF NPKIKHYMPD FKLAFEHFCI HAGGRALIDE LEKNLHLSPL
401: HVEASRMTLH RFGNTSSSSI WYELAYTEAK GRMKKGDRTW QIALGSGFKC NSCVWVALRN VKASADNPWE ECLNKYPVEI DI

Best Arabidopsis Sequence Match ( AT4G34250.1 )
(BLAST)

001: MDYPMKKVKI FFNYLMAHRF KLCFLPLMVA IAVEASRLST QDLQNFYLYL QNNHTSLTMF FLYLALGSTL YLMTRPKPVY LVDFSCYLPP SHLKASTQRI
101: MQHVRLVREA GAWKQESDYL MDFCEKILER SGLGQETYVP EGLQTLPLQQ NLAVSRIETE EVIIGAVDNL FRNTGISPSD IGILVVNSST FNPTPSLSSI
201: LVNKFKLRDN IKSLNLGGMG CSAGVIAIDA AKSLLQVHRN TYALVVSTEN ITQNLYMGNN KSMLVTNCLF RIGGAAILLS NRSIDRKRAK YELVHTVRVH
301: TGADDRSYEC ATQEEDEDGI VGVSLSKNLP MVAARTLKIN IATLGPLVLP ISEKFHFFVR FVKKKFLNPK LKHYIPDFKL AFEHFCIHAG GRALIDEMEK
401: NLHLTPLDVE ASRMTLHRFG NTSSSSIWYE LAYTEAKGRM TKGDRIWQIA LGSGFKCNSS VWVALRNVKP STNNPWEQCL HKYPVEIDID LKE

Arabidopsis Description

KCS163-ketoacyl-CoA synthase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYZ0]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.