Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
18260611
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009354_P001 | Maize | endoplasmic reticulum | 82.01 | 80.66 |
| EES03073 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 82.43 | 80.41 |
| TraesCS3A01G279400.1 | Wheat | plasma membrane | 80.13 | 78.32 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 79.5 | 78.03 |
| TraesCS3B01G313800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 79.5 | 75.1 |
| HORVU3Hr1G069880.2 | Barley | mitochondrion, plastid | 80.33 | 71.64 |
| Os02t0731900-01 | Rice | plasma membrane | 61.3 | 58.48 |
| Os06t0262800-01 | Rice | plasma membrane | 60.25 | 58.3 |
| Os03t0220100-01 | Rice | golgi, mitochondrion | 54.81 | 53.04 |
| KRH35956 | Soybean | plasma membrane | 53.56 | 51.61 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 53.56 | 51.61 |
| PGSC0003DMT400037757 | Potato | plastid | 49.37 | 51.19 |
| Os06t0260500-00 | Rice | mitochondrion | 56.07 | 50.85 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 52.3 | 50.81 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 41.21 | 50.64 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 52.3 | 50.4 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 52.09 | 50.2 |
| CDY42109 | Canola | plasma membrane | 52.09 | 50.1 |
| Bra024749.1-P | Field mustard | plasma membrane | 52.09 | 50.1 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 51.88 | 50.0 |
| Bra004034.1-P | Field mustard | plasma membrane | 51.46 | 50.0 |
| CDY04232 | Canola | plasma membrane | 51.67 | 49.7 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 51.46 | 49.6 |
| AT1G25450.1 | Thale cress | plasma membrane | 51.05 | 49.59 |
| CDY07381 | Canola | plasma membrane | 51.46 | 49.5 |
| AT1G68530.1 | Thale cress | plasma membrane | 51.26 | 49.3 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 43.31 | 49.29 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 51.05 | 49.19 |
| Solyc02g063140.2.1 | Tomato | golgi | 50.84 | 48.99 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 50.0 | 48.38 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 49.37 | 47.77 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 48.54 | 47.15 |
| Os11t0591200-01 | Rice | mitochondrion | 41.84 | 46.3 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 49.79 | 45.86 |
| Os05t0568000-02 | Rice | plasma membrane | 45.4 | 42.22 |
| Os05t0574600-01 | Rice | endoplasmic reticulum, peroxisome, plastid | 45.19 | 41.54 |
| Os02t0205500-01 | Rice | cytosol, peroxisome, plasma membrane | 44.35 | 40.85 |
| Os06t0598800-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 43.51 | 40.08 |
| Os10t0416200-01 | Rice | cytosol, mitochondrion | 43.31 | 39.58 |
| Os03t0181500-01 | Rice | plasma membrane | 41.63 | 36.72 |
| Os03t0245700-02 | Rice | cytosol, peroxisome, plastid | 40.8 | 36.65 |
| Os05t0574500-01 | Rice | nucleus | 7.32 | 15.84 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | EntrezGene:4323946 | MapMan:5.1.6.1.1 |
| InterPro:ACP_syn_III_C | ProteinID:BAB91850.1 | ProteinID:BAS72498.1 | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 |
| InterPro:IPR016039 | EnsemblPlantsGene:Os01g0529800 | EnsemblPlants:Os01t0529800-01 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 |
| PANTHER:PTHR31561 | PANTHER:PTHR31561:SF9 | UniProt:Q8LQT7 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like |
| UniParc:UPI00000A8405 | RefSeq:XP_015642682.1 | SEG:seg | : | : | : |
Description
Similar to Very-long-chain fatty acid condensing enzyme CUT1. (Os01t0529800-01)
Coordinates
chr1:+:19059236..19061167
Molecular Weight (calculated)
52284.3 Da
IEP (calculated)
8.164
GRAVY (calculated)
0.113
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLKAVYRV VVNNFLALAA AAVAAVLLRR PDELAARLRA VSSPLHAATA AVLAAGVARL VRARRARGVY LVEYGCFRPR PCYRAPFATC LEHAHLMPYL
101: VDEESVAFAI RLLERSGLGD ETCVPDAYHY MPPDRSLRAS RDESELVIFS AVDDVFARSA LTPADIDVLI VNCSIFTPTP VFADMVVNRY KLRAEVQNVN
201: LSGMGCSAGL VSVGLAKNLL QVSPPGTNVL IVSTEILSSQ YYVGTERAML LPNCLFRMGA AAMILSNSPD HARFRLGRVV RTVTAARDSD YRCVFQEEDE
301: QGNTGIRLSK DLATTAGHAL KSNIAAFGPL VLPASEQLLV AISFLKRKLK QLSGHAGKVR LYRPDFRTAF EHFCIHAGGR GVIDEVQHGL GLSDDDVEAS
401: RMTLHRFGNT SSSSVLYELA YLEAKGRMKR GDRVWMISFG AGFDCNSVAW ECVKPAPDAD GPWVDCIHRY PVQLPEIA
101: VDEESVAFAI RLLERSGLGD ETCVPDAYHY MPPDRSLRAS RDESELVIFS AVDDVFARSA LTPADIDVLI VNCSIFTPTP VFADMVVNRY KLRAEVQNVN
201: LSGMGCSAGL VSVGLAKNLL QVSPPGTNVL IVSTEILSSQ YYVGTERAML LPNCLFRMGA AAMILSNSPD HARFRLGRVV RTVTAARDSD YRCVFQEEDE
301: QGNTGIRLSK DLATTAGHAL KSNIAAFGPL VLPASEQLLV AISFLKRKLK QLSGHAGKVR LYRPDFRTAF EHFCIHAGGR GVIDEVQHGL GLSDDDVEAS
401: RMTLHRFGNT SSSSVLYELA YLEAKGRMKR GDRVWMISFG AGFDCNSVAW ECVKPAPDAD GPWVDCIHRY PVQLPEIA
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.