Factsheet for Os06t0598800-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
cytosol 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26640.1	Os11t0171500-01	AT4G09570.1	19130088
AT2G26640.1	Os12t0169800-00	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046444_P001	Maize	plasma membrane	93.64	94.37
EER88601	Sorghum	endoplasmic reticulum, plasma membrane, plastid	93.45	93.99
GSMUA_AchrUn_...	Banana	peroxisome	62.04	81.11
GSMUA_Achr7P08410_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	59.92	79.54
VIT_04s0008g04710.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	78.23	79.45
GSMUA_Achr10P...	Banana	plasma membrane	66.09	79.4
Os02t0205500-01	Rice	cytosol, peroxisome, plasma membrane	78.81	78.81
KRH03757	Soybean	cytosol, peroxisome, plasma membrane	77.26	78.63
KRH56654	Soybean	endoplasmic reticulum	77.26	78.63
Solyc08g067410.1.1	Tomato	plasma membrane	76.49	78.61
PGSC0003DMT400019029	Potato	plasma membrane	76.3	78.42
AT2G26640.1	Thale cress	plasma membrane	76.49	78.0
Solyc06g065560.1.1	Tomato	nucleus	77.07	77.97
PGSC0003DMT400067205	Potato	peroxisome	77.07	77.97
KRH63016	Soybean	cytosol, peroxisome, plasma membrane	75.72	77.06
CDX70186	Canola	plastid	76.11	77.0
Os05t0574600-01	Rice	endoplasmic reticulum, peroxisome, plastid	76.88	76.73
CDX98800	Canola	plastid	76.3	76.45
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	76.11	76.4
KRH54862	Soybean	cytosol, peroxisome, plasma membrane	74.76	76.08
Os11t0591200-01	Rice	mitochondrion	61.27	73.61
Solyc12g006820.1.1	Tomato	plasma membrane	70.52	73.2
PGSC0003DMT400002734	Potato	cytosol, peroxisome, plasma membrane	70.52	71.62
Os05t0568000-02	Rice	plasma membrane	66.47	67.12
VIT_11s0016g04700.t01	Wine grape	plastid	79.0	66.45
Os03t0220100-01	Rice	golgi, mitochondrion	58.57	61.54
Os03t0245700-02	Rice	cytosol, peroxisome, plastid	59.15	57.71
Os10t0416200-01	Rice	cytosol, mitochondrion	52.6	52.2
Os03t0181500-01	Rice	plasma membrane	52.79	50.55
Os02t0731900-01	Rice	plasma membrane	47.4	49.1
Os06t0262800-01	Rice	plasma membrane	46.05	48.38
Os01t0529800-01	Rice	plasma membrane	40.08	43.51
Os06t0260500-00	Rice	mitochondrion	42.0	41.37
Os05t0574500-01	Rice	nucleus	7.71	18.1

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	EntrezGene:4341445	MapMan:5.1.6.1.1
InterPro:ACP_syn_III_C	ProteinID:BAD32939.1	ProteinID:BAF19910.1	ProteinID:BAS98479.1	ProteinID:EAZ37545.1	InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os06g0598800	EnsemblPlants:Os06t0598800-01	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF8	UniProt:Q69X62	SUPFAM:SSF53901
TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI00003FF2B5	RefSeq:XP_015644205.1	RefSeq:XP_015644206.1	SEG:seg

Description

WAX CRYSTAL-SPARSE LEAF 1Similar to Fatty acid elongase 1-like protein. (Os06t0598800-01)

Coordinates

chr6:+:23608738..23611096

Molecular Weight (calculated)

58015.7 Da

IEP (calculated)

9.251

GRAVY (calculated)

-0.088

Length

519 amino acids

Sequence
(BLAST)

001: METSAAAAPN GGAAAAEQQQ RRRLPDFQQS VRLKYVKLGY HYLISHGMYL LLSPLMALVA VQLSTVSPGD IADLWEQLRF NLLSVVACST LLVFLSTLYF
101: LTRPRPVYLL DFACYKPDPQ RKCTRETFMR CSSLTGSFTD ANLDFQRKIL ERSGLGEDTY LPPAVLRVPP NPCMDEARKE ARTVMFGAID QLLEKTGVKP
201: KDIGVVVVNC SLFNPTPSLS AMVVNHYKLR GNVISYNLGG MGCSAGLLSV DLAKDLLQVH PNSYALVVSM ENITLNWYFG NNRSMLVSNC LFRMGGAAIL
301: LSNRRSDRRR SKYELVHTVR THKGANDKCF GCVTQEEDEI GKIGVSLSKD LMAVAGDALK TNITTLGPLV LPLSEQLLFM ATLVAKKVLK MKIKPYIPDF
401: KLAFEHFCIH AGGRAVLDEL EKNLELTDWH MEPSRMTLYR FGNTSSSSLW YELAYTEAKG RIRKRDRIWQ IAFGSGFKCN SAVWKALQTV NPAKEKNPWM
501: DEIDNFPVEV PKISKVGNA

Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)

001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI

Arabidopsis Description

KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.