Factsheet for Os06t0260500-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037328_P001	Maize	cytosol	64.33	92.37
KXG19727	Sorghum	mitochondrion, plastid	73.24	78.3
TraesCS7A01G205700.1	Wheat	golgi	70.97	76.17
TraesCS7B01G113000.1	Wheat	golgi	70.4	75.56
TraesCS7D01G208500.1	Wheat	golgi	70.4	75.1
Os02t0731900-01	Rice	plasma membrane	64.52	67.86
Os06t0262800-01	Rice	plasma membrane	62.81	67.0
Os01t0529800-01	Rice	plasma membrane	50.85	56.07
Os03t0220100-01	Rice	golgi, mitochondrion	51.23	54.66
KRG90814	Soybean	cytosol, golgi, plasma membrane	50.85	54.03
KRH35956	Soybean	plasma membrane	50.85	54.03
VIT_14s0006g02990.t01	Wine grape	plasma membrane	50.28	53.86
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	50.47	53.63
Solyc02g085870.2.1	Tomato	plasma membrane	50.09	53.23
PGSC0003DMT400037757	Potato	plastid	46.49	53.15
PGSC0003DMT400032993	Potato	plasma membrane	49.72	52.82
Bra004034.1-P	Field mustard	plasma membrane	49.15	52.64
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	49.53	52.62
CDY42109	Canola	plasma membrane	49.53	52.52
Bra024749.1-P	Field mustard	plasma membrane	49.53	52.52
GSMUA_Achr3P07400_001	Banana	plasma membrane	38.71	52.44
CDY04232	Canola	plasma membrane	49.34	52.31
CDY07381	Canola	plasma membrane	49.15	52.11
AT1G25450.1	Thale cress	plasma membrane	48.58	52.03
AT1G68530.1	Thale cress	plasma membrane	48.96	51.91
Solyc02g063140.2.1	Tomato	golgi	48.77	51.81
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	48.58	51.61
PGSC0003DMT400037714	Potato	plasma membrane	48.2	51.42
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	47.25	50.4
GSMUA_Achr5P05870_001	Banana	plasma membrane	39.85	50.0
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	45.54	48.78
Os11t0591200-01	Rice	mitochondrion	39.85	48.61
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	46.3	47.01
Os05t0568000-02	Rice	plasma membrane	43.07	44.16
Os05t0574600-01	Rice	endoplasmic reticulum, peroxisome, plastid	41.75	42.31
Os06t0598800-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	41.37	42.0
Os02t0205500-01	Rice	cytosol, peroxisome, plasma membrane	41.37	42.0
Os10t0416200-01	Rice	cytosol, mitochondrion	39.09	39.39
Os03t0245700-02	Rice	cytosol, peroxisome, plastid	39.47	39.1
Os03t0181500-01	Rice	plasma membrane	37.19	36.16
Os05t0574500-01	Rice	nucleus	6.45	15.38

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A0P0WUT4
InterPro:ACP_syn_III_C	ProteinID:BAS97122.1	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
EnsemblPlantsGene:Os06g0260500	EnsemblPlants:Os06t0260500-00	PFAM:PF08392	PFAM:PF08541	PANTHER:PTHR31561	PANTHER:PTHR31561:SF64
SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000393ACFD	SEG:seg	:	:

Description

Similar to 3-ketoacyl-CoA synthase. (Os06t0260500-00)

Coordinates

chr6:-:8408770..8410450

Molecular Weight (calculated)

57418.2 Da

IEP (calculated)

9.806

GRAVY (calculated)

-0.134

Length

527 amino acids

Sequence
(BLAST)

001: RLATTDLLRV KTPPRCPQPT CVKFVARLAL NSLHSSFPPR LTDRVHHTPH SPLADRSHCR RRRLHRQNEL VVVVGAAEAA EAAVPACGEQ FPRGDGRAAG
101: RGGDRQRGAG RAGRAAPDGA RAAAGARLPG SVRAGGGRDA HAKLVTYVEG ASIDERSVRF MTRLLERSGL GEETCLPPAH HFIPPYRNLE ASRAEVEVVI
201: FNAIDDLLAK TGISPAAIDI LVVNCSLFAP IPSFTDMIIN NYKMRSDIRN VHLSGMGCSA GLISVGLARN FLQVAPHGAH ALVVSTETIT PNYYVGKERA
301: MLLPNCLFRM GGAAVLLSTS RAKARFRLSR VVRTLTGAQD SAYRCVFQEE DGEGHRGINL SKDLMTIAGD SLKANITAIG PLVLPASEQL LFALSFIARR
401: VLNRRVKPYL PDFRMAFEHF CIHAGGRAVI DELQRSLGLS DEHVEASRMA LHRFGNTSSS SVWYELAYIE AKGRMRPGDR VWMIGFGSGF KCNSAAWECI
501: SPARNADGPW ADSICRYPVD IPEVLKH

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.