Factsheet for Os05t0574600-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, peroxisome

Predictor Summary:

plastid 3
endoplasmic reticulum 1
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26640.1	Os11t0171500-01	AT4G09570.1	19130088
AT2G26640.1	Os12t0169800-00	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19987	Sorghum	cytosol, endoplasmic reticulum, plastid	86.73	87.91
Zm00001d039094_P001	Maize	cytosol	83.46	85.27
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	81.35	81.66
VIT_04s0008g04710.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	80.0	81.41
TraesCS1A01G413400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	80.96	80.96
TraesCS1D01G420900.1	Wheat	peroxisome	80.38	80.54
KRH56654	Soybean	endoplasmic reticulum	78.27	79.8
KRH03757	Soybean	cytosol, peroxisome, plasma membrane	78.08	79.61
Solyc08g067410.1.1	Tomato	plasma membrane	76.92	79.21
PGSC0003DMT400019029	Potato	plasma membrane	76.73	79.01
CDX70186	Canola	plastid	77.31	78.36
Solyc06g065560.1.1	Tomato	nucleus	77.12	78.17
AT2G26640.1	Thale cress	plasma membrane	76.35	78.0
PGSC0003DMT400067205	Potato	peroxisome	76.73	77.78
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	77.31	77.76
KRH63016	Soybean	cytosol, peroxisome, plasma membrane	76.15	77.65
CDX98800	Canola	plastid	77.12	77.41
Os06t0598800-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	76.73	76.88
KRH54862	Soybean	cytosol, peroxisome, plasma membrane	75.19	76.67
Os02t0205500-01	Rice	cytosol, peroxisome, plasma membrane	75.0	75.14
Solyc12g006820.1.1	Tomato	plasma membrane	70.38	73.2
PGSC0003DMT400002734	Potato	cytosol, peroxisome, plasma membrane	71.15	72.41
Os11t0591200-01	Rice	mitochondrion	59.62	71.76
Os05t0568000-02	Rice	plasma membrane	66.35	67.12
VIT_11s0016g04700.t01	Wine grape	plastid	78.85	66.45
Os03t0220100-01	Rice	golgi, mitochondrion	59.04	62.15
Os03t0245700-02	Rice	cytosol, peroxisome, plastid	58.85	57.52
Os10t0416200-01	Rice	cytosol, mitochondrion	53.65	53.35
Os03t0181500-01	Rice	plasma membrane	53.65	51.48
Os06t0262800-01	Rice	plasma membrane	47.5	50.0
Os02t0731900-01	Rice	plasma membrane	47.31	49.1
Os01t0529800-01	Rice	plasma membrane	41.54	45.19
Os06t0260500-00	Rice	mitochondrion	42.31	41.75
Os05t0574500-01	Rice	nucleus	8.08	19.0

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	EntrezGene:4339684	MapMan:5.1.6.1.1
ProteinID:AAT69586.1	InterPro:ACP_syn_III_C	EMBL:AK070754	ProteinID:BAF18305.1	ProteinID:BAS95463.1	ProteinID:EEE64780.1
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os05g0574600	EnsemblPlants:Os05t0574600-01
PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF19	UniProt:Q6F365
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI00003BF568	RefSeq:XP_015639791.1	RefSeq:XP_015639792.1
RefSeq:XP_015639793.1	SEG:seg	:	:	:	:

Description

Chalcone Synthase, FATTY ACID ELONGATION1, fatty acid elongase 1Similar to 3-ketoacyl-CoA synthase. (Os05t0574600-01)

Coordinates

chr5:-:28625224..28627550

Molecular Weight (calculated)

58050.5 Da

IEP (calculated)

9.411

GRAVY (calculated)

-0.100

Length

520 amino acids

Sequence
(BLAST)

001: MAEQQQQQAP LLQRPAAAPP SSSRLPDFKQ SVKLKYVKLG YHYLITHGAY LLLAPLPGLV AAHLSTFTLG DLADLWQNLQ YNLVSVLLCS TLLVLVSTAY
101: FLTRPRPVYL VDFACYKPDD ERKCSRARFM NCTERLGTFT PENVEFQRKI IERSGLGEDT YLPEAVLNIP PNPSMANARK EAEMVMYGAL DELLAKTGVN
201: PKDIGILVVN CSLFNPTPSL SAMVVNHYKL RGNVVSYNLG GMGCSAGLIS IDLAKDLLQV YPNTYAVVIS MENITLNWYF GNDRSMLVSN CLFRMGGAAI
301: LLSNRGSARR RSKYQLVHTV RTHRGADDRC FGCVTQREDA DGKTGVSLSK DLMAVAGEAL KTNITTLGPL VLPMSEQLLF FATLVTRKVL KRKVKPYIPD
401: FKLAFEHFCI HAGGRAVLDE LEKNLQLSDW HMEPSRMTLH RFGNTSSSSL WYELAYAEAK GRIKKGDRTW QIAFGSGFKC NSAVWRALRS VNPAKENNFT
501: NPWIDEIHRF PVPVPKVSAI

Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)

001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI

Arabidopsis Description

KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.