Factsheet for HORVU5Hr1G122360.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G439000.1	Wheat	plasma membrane	88.87	87.8
HORVU5Hr1G087530.1	Barley	plasma membrane	83.2	84.57
Zm00001d044579_P001	Maize	golgi	60.93	60.93
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	65.59	60.45
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	52.63	53.72
HORVU7Hr1G023540.1	Barley	mitochondrion	30.97	53.68
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	49.19	52.83
HORVU1Hr1G086760.1	Barley	cytosol	52.83	51.68
HORVU7Hr1G006910.1	Barley	plasma membrane	49.8	50.51
HORVU3Hr1G097570.1	Barley	golgi	49.8	50.31
PGSC0003DMT400037757	Potato	plastid	45.34	48.59
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	47.37	47.76
HORVU7Hr1G042040.1	Barley	golgi	47.37	47.18
HORVU6Hr1G004830.1	Barley	golgi	47.37	47.18
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	44.53	47.01
HORVU6Hr1G082270.1	Barley	golgi	48.38	46.68
HORVU7Hr1G042050.1	Barley	golgi	45.95	46.61
KRG90814	Soybean	cytosol, golgi, plasma membrane	46.76	46.57
GSMUA_Achr3P07400_001	Banana	plasma membrane	36.64	46.53
KRH35956	Soybean	plasma membrane	46.56	46.37
HORVU4Hr1G067340.2	Barley	golgi	46.56	45.91
PGSC0003DMT400037714	Potato	plasma membrane	45.55	45.55
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	45.55	45.55
VIT_14s0006g02990.t01	Wine grape	plasma membrane	45.34	45.53
Bra004034.1-P	Field mustard	plasma membrane	44.94	45.12
AT1G68530.1	Thale cress	plasma membrane	45.34	45.07
Bra024749.1-P	Field mustard	plasma membrane	45.34	45.07
CDY42109	Canola	plasma membrane	45.34	45.07
Solyc02g085870.2.1	Tomato	plasma membrane	45.14	44.96
CDY04232	Canola	plasma membrane	45.14	44.87
PGSC0003DMT400032993	Potato	plasma membrane	44.94	44.76
CDY07381	Canola	plasma membrane	44.94	44.67
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	44.74	44.56
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	44.74	44.56
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	42.51	44.3
GSMUA_Achr5P05870_001	Banana	plasma membrane	37.65	44.29
AT1G25450.1	Thale cress	plasma membrane	43.93	44.11
HORVU7Hr1G023280.1	Barley	plasma membrane	40.28	44.03
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	44.13	43.95
Solyc02g063140.2.1	Tomato	golgi	44.13	43.95
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	45.95	43.74
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	42.91	43.09
HORVU7Hr1G030880.1	Barley	plasma membrane	43.12	42.69
HORVU7Hr1G022720.1	Barley	plasma membrane	30.16	41.5
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	28.74	38.9
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	39.07	37.26
HORVU4Hr1G073840.2	Barley	golgi	38.06	36.94
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	34.41	35.05
HORVU4Hr1G063420.1	Barley	peroxisome	37.45	33.95
HORVU1Hr1G089710.3	Barley	plastid	40.28	33.79
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	38.66	33.1
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	38.26	31.5
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	23.48	26.48

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A287T051
InterPro:ACP_syn_III_C	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU5Hr1G122360	EnsemblPlants:HORVU5Hr1G122360.1
InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF9
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B46D712	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287T051]

Coordinates

chrchr5H:-:662020508..662022052

Molecular Weight (calculated)

53967.5 Da

IEP (calculated)

8.564

GRAVY (calculated)

0.150

Length

494 amino acids

Sequence
(BLAST)

001: LTTTTMLGSY SHVRFLDTWR TAIFVKVLLA VAVPAALFLS ASGKLTVGGL SCLPPFYVFA TAIIIAAAVS SKLRHMCRPK EVYLVEYGCF RPRPCYRAPL
101: ATCREHAQLM PDRFDEQSIN FMMRLIARSG LGAETCVPVA YHYIPPDRSL KASREEAELV IFSGIDEAFA KTKSFLKPTD VDVLVLNCSV LAPTPSFIDM
201: VVNRYKLHAD VGCFNLSGMG CSAALVSVGL VRNILRVARP GTHALIVSTE ILSSTYYTGT DPSMLLPNCL FRMGAAATIL SNSPEGARFR LGPVVRTVTS
301: ARDVDYRCVY MDEDDKGNTA IRLSRNLPAT AGGALRDNVA AFAPLVLPAS EQIRVALSIL KRKLLFLLGR RADGTLYRPD FRTAFEHFCI HAGGRSVINE
401: AQNGLGLSDD DVEASRMTLH RFGNTSSSSV LYELAYTEAK GRMKKGDRVW MVSFGAGFEC NSVAWVCIKP AAGDDCGPWA DSINRYPVQL PDVV

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.