Factsheet for HORVU4Hr1G073840.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 2
golgi 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G278800.1	Wheat	golgi	97.64	97.45
TraesCS4D01G277300.1	Wheat	golgi	97.25	97.25
TraesCS4A01G025300.1	Wheat	golgi	97.25	97.25
EER95458	Sorghum	mitochondrion	74.26	71.46
Zm00001d027766_P001	Maize	mitochondrion	73.28	70.51
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	65.23	68.45
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	45.97	58.65
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	56.39	55.41
HORVU4Hr1G067340.2	Barley	golgi	50.49	51.3
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	46.95	49.38
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	43.61	48.26
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	56.39	47.83
HORVU7Hr1G023540.1	Barley	mitochondrion	26.72	47.72
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	54.03	47.66
HORVU7Hr1G006910.1	Barley	plasma membrane	45.38	47.43
HORVU1Hr1G086760.1	Barley	cytosol	46.17	46.53
HORVU4Hr1G063420.1	Barley	peroxisome	48.92	45.69
HORVU1Hr1G089710.3	Barley	plastid	52.26	45.16
HORVU7Hr1G023280.1	Barley	plasma membrane	39.49	44.47
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	40.47	44.02
HORVU3Hr1G097570.1	Barley	golgi	42.04	43.76
HORVU7Hr1G042050.1	Barley	golgi	41.45	43.33
HORVU6Hr1G004830.1	Barley	golgi	41.45	42.54
HORVU7Hr1G042040.1	Barley	golgi	41.06	42.14
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	40.27	41.84
HORVU6Hr1G082270.1	Barley	golgi	41.65	41.41
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	37.33	40.08
HORVU7Hr1G030880.1	Barley	plasma membrane	39.29	40.08
HORVU5Hr1G087530.1	Barley	plasma membrane	37.33	39.09
HORVU7Hr1G022720.1	Barley	plasma membrane	27.5	39.0
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	27.5	38.36
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.94	38.06
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	39.1	37.13
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	30.65	35.62

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
EMBL:AK357799	UniProt:F2D1P2	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU4Hr1G073840
EnsemblPlants:HORVU4Hr1G073840.2	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF13	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI00020051C8	SEG:seg

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F2D1P2]

Coordinates

chrchr4H:+:591922805..591927825

Molecular Weight (calculated)

55603.3 Da

IEP (calculated)

8.879

GRAVY (calculated)

0.052

Length

509 amino acids

Sequence
(BLAST)

001: MDRDLFRTVK QGTRNQARLL YHRLVCRLPH LLAVTLLLVV APPLVSTLSI AALWSEARAN AAVLVAACAG CVAAAYAYAV SRPRPVYLVD MAGYKPGPAH
101: EATRAQAIRQ FGLAGGFDDE SMSFQKRMME RSGLGEATHF PASLMSIPVD MCLQTARDES EAVVFGVVDE LLAKTGVRAQ DIGVVIANSS LYSPTPSFVS
201: LIVNRYRLRH DIVSHNLSGM GCSAGIIAID LAKHLLQVHP DTYALVVSTE NITLNAYLGN NRPMLVTNTL FRVGGAAVLL SNRRRERARA KYQLIHTVRT
301: HRGASDRSYG CVTQEEDEAG HVGVSLSKEL MSVAGEALRT NITTLGPLVL PLSEQLRFLA TVVLKRVFRA DVKPHIPDFT LALDHFCIHA GGRGVLDELE
401: RSLKLSAWHM EPSRMTLYRF GNTSSSSLWY ELAYCEAKGR IKKGDRVWQI AFGSGFKCNS AVWKALRPVD AVAVGDSGSP WAQDVDVLPV HVPKVVPIDD
501: DEASYKTAA

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.