Factsheet for HORVU7Hr1G030880.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	67.13	71.58
HORVU7Hr1G023540.1	Barley	mitochondrion	40.88	71.58
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	52.1	71.23
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	66.53	70.04
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	49.7	53.91
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	50.9	52.48
HORVU1Hr1G086760.1	Barley	cytosol	51.1	50.49
HORVU3Hr1G097570.1	Barley	golgi	48.5	49.49
HORVU7Hr1G006910.1	Barley	plasma membrane	48.1	49.28
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	47.9	48.78
HORVU7Hr1G042040.1	Barley	golgi	48.1	48.39
HORVU7Hr1G042050.1	Barley	golgi	46.69	47.84
HORVU7Hr1G023280.1	Barley	plasma membrane	43.29	47.79
HORVU6Hr1G004830.1	Barley	golgi	47.29	47.58
HORVU7Hr1G022720.1	Barley	plasma membrane	34.07	47.35
VIT_14s0006g02990.t01	Wine grape	plasma membrane	45.49	46.14
KRH35956	Soybean	plasma membrane	45.69	45.97
PGSC0003DMT400037757	Potato	plastid	42.28	45.77
KRG90814	Soybean	cytosol, golgi, plasma membrane	45.29	45.56
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	45.09	45.36
HORVU6Hr1G082270.1	Barley	golgi	46.29	45.12
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	44.49	44.76
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	43.69	44.31
CDY04232	Canola	plasma membrane	44.09	44.27
Bra004034.1-P	Field mustard	plasma membrane	43.49	44.11
CDY07381	Canola	plasma membrane	43.89	44.06
HORVU5Hr1G087530.1	Barley	plasma membrane	42.89	44.03
Bra024749.1-P	Field mustard	plasma membrane	43.69	43.86
Solyc02g085870.2.1	Tomato	plasma membrane	43.49	43.75
PGSC0003DMT400032993	Potato	plasma membrane	43.49	43.75
CDY42109	Canola	plasma membrane	43.49	43.66
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	43.09	43.52
HORVU4Hr1G067340.2	Barley	golgi	43.69	43.51
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	43.09	43.35
PGSC0003DMT400037714	Potato	plasma membrane	42.89	43.32
AT1G25450.1	Thale cress	plasma membrane	42.69	43.29
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	42.69	43.12
Solyc02g063140.2.1	Tomato	golgi	42.69	42.94
AT1G68530.1	Thale cress	plasma membrane	42.28	42.45
GSMUA_Achr3P07400_001	Banana	plasma membrane	33.07	42.42
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	45.49	42.35
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	43.29	41.62
GSMUA_Achr5P05870_001	Banana	plasma membrane	33.67	40.0
HORVU4Hr1G073840.2	Barley	golgi	40.08	39.29
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	40.28	38.8
HORVU4Hr1G063420.1	Barley	peroxisome	39.88	36.51
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	35.47	36.49
HORVU1Hr1G089710.3	Barley	plastid	42.08	35.65
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	40.08	34.66
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	39.88	33.17
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	24.45	27.85

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A287VX55
InterPro:ACP_syn_III_C	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU7Hr1G030880	EnsemblPlants:HORVU7Hr1G030880.1
InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF18
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B47CE84	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287VX55]

Coordinates

chrchr7H:+:62396767..62398653

Molecular Weight (calculated)

54822.7 Da

IEP (calculated)

8.612

GRAVY (calculated)

0.170

Length

499 amino acids

Sequence
(BLAST)

001: YPHRSSWMHV NYNCTANNMS SGSDLKGLTL LYNRTAKILV QPIVTTTTLA PGVLNKGAPW LAAAHQIVPQ SSAIIVVVLL IITATVYLAF RPKIVYLIDY
101: ACFQPSSNLR VAKANFLEHQ HLSPLLVDST VNFIATVLER SGMGDETCVP PVLHYIEPYC GLDEARAEAE LVVFSAVDDL LAKTGINLDA ISVLITNISA
201: FCPVPSIADV IVNRYKLRGD LRIINLSGMA CSASVNAVGL ASNMLRVMPR GSHALLVSTE TIGPSYYEGN TRSMQLSNIL FRIGGAAKLL SCSRGKARFR
301: LGHFTRTITA ANNDAYQCAY QEEDEEGNLG VALSKDIMNV ARDTLKVNIM ATAPLVLPAS EFLMFLLFFV AKKVFCRRNT RPYIPNFCVA FEHFCIHVGG
401: PAVITSVQRG LNLSDKHVEP SKMTLHRFGN QSTSSVWYQL SYIEAKGRMK KDDKVWMIGF GAGYECNTIG WVCIQPSSRV DGPWASCIHR YPVDVSKIG

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.