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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • plastid 1
  • golgi 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:golgi
Plant-mPloc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G242200.1 Wheat mitochondrion, plasma membrane 97.21 98.19
TraesCS4A01G065300.1 Wheat mitochondrion, plasma membrane 96.21 97.18
Os03t0220100-01 Rice golgi, mitochondrion 89.62 90.89
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 89.42 90.69
EER92628 Sorghum plasma membrane 89.42 90.69
Zm00001d048061_P001 Maize golgi 85.83 87.04
GSMUA_Achr2P21590_001 Banana golgi, peroxisome, plastid 62.87 81.61
GSMUA_Achr3P02180_001 Banana plasma membrane 57.48 81.59
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi, plasma membrane 71.46 80.81
VIT_14s0006g02990.t01 Wine grape plasma membrane 77.45 78.86
KRH35956 Soybean plasma membrane 77.64 78.43
KRG90814 Soybean cytosol, golgi, plasma membrane 77.25 78.02
VIT_01s0011g03490.t01 Wine grape cytosol, golgi, plasma membrane 76.05 76.81
Bra004034.1-P Field mustard plasma membrane 74.45 75.81
PGSC0003DMT400032993 Potato plasma membrane 75.05 75.81
AT1G68530.1 Thale cress plasma membrane 74.85 75.45
CDY04232 Canola plasma membrane 74.85 75.45
Solyc02g085870.2.1 Tomato plasma membrane 74.65 75.4
CDY07381 Canola plasma membrane 74.65 75.25
GSMUA_Achr8P30930_001 Banana endoplasmic reticulum, extracellular 57.88 75.13
AT1G25450.1 Thale cress plasma membrane 73.65 75.0
KRH45255 Soybean endoplasmic reticulum, peroxisome, plasma membrane 74.25 75.0
PGSC0003DMT400062136 Potato cytosol, golgi, plasma membrane 74.05 74.8
Solyc02g063140.2.1 Tomato golgi 73.85 74.6
CDY42109 Canola plasma membrane 73.85 74.45
Bra024749.1-P Field mustard plasma membrane 73.85 74.45
PGSC0003DMT400037757 Potato plastid 65.67 71.37
PGSC0003DMT400037714 Potato plasma membrane 68.26 69.23
VIT_19s0093g00440.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 67.27 68.5
Solyc05g009270.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 67.07 68.02
Solyc05g009280.2.1 Tomato golgi, plasma membrane, plastid 68.86 66.47
HORVU0Hr1G038430.1 Barley endoplasmic reticulum, plasma membrane 55.29 60.22
HORVU6Hr1G073300.1 Barley golgi, plasma membrane 58.08 60.12
HORVU1Hr1G090730.1 Barley peroxisome, plasma membrane, plastid 59.68 57.72
HORVU1Hr1G086760.1 Barley cytosol 57.09 56.63
HORVU7Hr1G006910.1 Barley plasma membrane 54.89 56.47
HORVU1Hr1G089710.3 Barley plastid 64.47 54.84
HORVU7Hr1G042040.1 Barley golgi 53.29 53.83
HORVU6Hr1G094160.2 Barley endoplasmic reticulum, golgi, plasma membrane 52.49 53.67
HORVU6Hr1G036950.5 Barley cytosol, peroxisome 61.48 53.38
HORVU3Hr1G097570.1 Barley golgi 51.3 52.56
HORVU7Hr1G023540.1 Barley mitochondrion 29.74 52.28
HORVU6Hr1G004830.1 Barley golgi 50.9 51.41
HORVU6Hr1G082270.1 Barley golgi 52.49 51.37
HORVU7Hr1G084610.6 Barley cytosol, mitochondrion, plastid 61.48 51.33
HORVU7Hr1G042050.1 Barley golgi 49.3 50.72
HORVU7Hr1G023280.1 Barley plasma membrane 45.71 50.66
HORVU4Hr1G073840.2 Barley golgi 51.3 50.49
HORVU4Hr1G063420.1 Barley peroxisome 53.89 49.54
HORVU5Hr1G087530.1 Barley plasma membrane 46.31 47.74
HORVU7Hr1G022720.1 Barley plasma membrane 33.73 47.08
HORVU7Hr1G023530.2 Barley endoplasmic reticulum, extracellular 45.51 47.01
HORVU2Hr1G112840.1 Barley endoplasmic reticulum, golgi 43.71 46.79
HORVU5Hr1G122360.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 45.91 46.56
HORVU3Hr1G069880.2 Barley mitochondrion, plastid 49.5 46.27
HORVU7Hr1G022580.1 Barley golgi, mitochondrion 32.53 44.66
HORVU7Hr1G022780.1 Barley golgi, mitochondrion 41.52 43.88
HORVU7Hr1G030880.1 Barley plasma membrane 43.51 43.69
HORVU4Hr1G076940.1 Barley mitochondrion, peroxisome, plastid 37.52 42.92
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740
GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:HORVU4Hr1G067340EnsemblPlants:HORVU4Hr1G067340.2InterPro:IPR016039UniProt:M0WHN5
PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF5SUPFAM:SSF53901
TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI00015FE4F2SEG:seg::
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:M0WHN5]
Coordinates
chrchr4H:-:558694625..558697186
Molecular Weight (calculated)
56610.4 Da
IEP (calculated)
9.567
GRAVY (calculated)
-0.017
Length
501 amino acids
Sequence
(BLAST)
001: MDRAIMPSAL GSGLAGSVKL KYVKLGYQYL VNHFLTLLLV PVMAATALEL ARLGPDELLT LWRSLHLDLV HILCSAFLVV FVATVYFMSR PRPVFLVDYC
101: CYKPSPSFRV PFTTFMEHIK LISNNDKSLR FQTRILERSG LGEETCLPPA NHYIPPNPSM EASRAEAQLV IFNAIDDLVR RTGIKPKDID ILVVNCSLFS
201: PTPSLSAMII NKYKLRSNIR SFNLSGMGCS AGLISIDLAR DMLQVHPNSN ALVISTEIIT PNFYHGSRRD MLLPNCLFRM GAAAILLSNR RREARRAKYR
301: LVHVVRTHKG ADDRAYRCVY EEEDDEGHSG ISLSKELMAI AGEALKSNIT TMGPLVLPMS EQLLFFFRLV GRKVINKKWK PYIPDFKLAF EHFCIHAGGR
401: AVIDELQKNL ELSPRHVEAS RMTLHRFGNT SSSSLWYELA YIEAKGRMRK GDRVWQIGFG SGFKCNSAVW KCLRTVNTPT DGPWDDCIQR YPVHIPEVVK
501: L
Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.